Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC120338.1-201ENST00000625074 1541 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 PANDAR-201ENST00000629595 1506 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC006484.1-201ENST00000435086 1884 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 MTND5P31-201ENST00000419366 1374 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC103591.2-201ENST00000265259 766 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 SNORA16A-201ENST00000384342 137 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 USP9YP26-201ENST00000421008 661 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC009237.2-201ENST00000421358 284 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC108075.1-201ENST00000424692 529 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 HSPD1P12-201ENST00000429127 1069 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 PSMD10P3-201ENST00000437000 448 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 CEACAMP7-201ENST00000444105 496 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 RPS26P56-201ENST00000444468 240 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 RNU7-125P-201ENST00000458760 62 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 BZW1P2-201ENST00000473537 826 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 RPS3AP43-201ENST00000479743 781 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 FTH1P24-201ENST00000503502 462 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC109464.1-201ENST00000511091 819 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 OR5AK1P-201ENST00000524837 922 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC122688.1-201ENST00000541494 223 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC010620.1-201ENST00000601088 1102 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC112220.3-201ENST00000605502 502 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AL139418.1-201ENST00000613613 177 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AL354976.1-201ENST00000613843 387 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC122133.1-201ENST00000613964 233 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AL136981.2-201ENST00000617319 734 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC004777.1-201ENST00000624317 287 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC010608.2-201ENST00000624830 470 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 AC011493.1-201ENST00000596753 1632 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 SAMMSON-213ENST00000641336 1521 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 OR4F13P-202ENST00000560066 2054 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC144BQ3MJ40 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AL137141.1-201ENST00000624622 4836 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 RNU4-4P-201ENST00000364588 130 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 Y_RNA.408-201ENST00000383987 102 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AL009179.1-201ENST00000406085 265 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 RBMY2KP-201ENST00000418221 992 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AC062016.2-201ENST00000420950 676 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AL022400.1-201ENST00000423946 935 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 RPL12P34-201ENST00000424532 479 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 UBE2V1P1-201ENST00000430836 445 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AC005345.1-201ENST00000431868 217 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AC008072.1-201ENST00000434254 824 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AC092647.3-201ENST00000443044 633 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 XKRY-201ENST00000510392 1100 ntBASIC6.23□□□□□ -1.41
CCDC144BQ3MJ40 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms