Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL645927.2-201ENST00000618350 349 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AC007546.1-201ENST00000619452 559 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AL133370.2-201ENST00000619934 439 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.91□□□□□ -1.78
RFX4Q33E94 AC022893.2-201ENST00000564832 3296 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.91□□□□□ -1.78
RFX4Q33E94 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
RFX4Q33E94 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.78
RFX4Q33E94 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX4Q33E94 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 RNU1-130P-201ENST00000363930 160 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 MIR421-201ENST00000365696 85 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 SNORA37-201ENST00000384504 129 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 MIR3074-201ENST00000384885 81 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 MT-TP-201ENST00000387461 68 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.9□□□□□ -1.79
RFX4Q33E94 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.9□□□□□ -1.79
RFX4Q33E94 UQCRBP1-201ENST00000421129 336 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 RPL7AP25-201ENST00000423357 805 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 MTCO1P54-201ENST00000430139 712 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AC096638.2-201ENST00000434965 711 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 DHFRP3-201ENST00000455595 559 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 RPL7AP52-201ENST00000458096 790 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 PPIAP21-201ENST00000464473 501 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 RPL31P61-201ENST00000496160 376 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.9□□□□□ -1.79
RFX4Q33E94 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX4Q33E94 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
RFX4Q33E94 RNU6-347P-201ENST00000516658 105 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.9□□□□□ -1.79
RFX4Q33E94 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.9□□□□□ -1.79
RFX4Q33E94 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.9□□□□□ -1.79
RFX4Q33E94 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AC051619.2-201ENST00000559063 397 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX4Q33E94 MIR4480-201ENST00000582492 71 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC034236.3-201ENST00000605999 461 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AP005019.3-201ENST00000620418 560 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC105105.5-201ENST00000622635 1294 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX4Q33E94 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX4Q33E94 AL139254.3-201ENST00000641097 674 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.79
RFX4Q33E94 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 AC134882.1-201ENST00000603738 1676 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 CASC19-284ENST00000642142 1868 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 AC009951.1-201ENST00000623674 2614 ntBASIC3.9□□□□□ -1.79
RFX4Q33E94 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX4Q33E94 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX4Q33E94 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFX4Q33E94 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFX4Q33E94 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX4Q33E94 AL035419.1-201ENST00000397037 564 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AL034403.1-201ENST00000399414 885 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFX4Q33E94 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 BRWD1P3-201ENST00000428816 390 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 USP9YP9-201ENST00000429406 715 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 VDAC1P6-201ENST00000430062 855 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.89□□□□□ -1.79
RFX4Q33E94 MTCO1P57-201ENST00000432182 261 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC006466.1-201ENST00000438721 289 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 BUD31P2-201ENST00000449374 300 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC239809.1-201ENST00000450470 217 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC010374.1-201ENST00000503762 1237 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC005798.1-201ENST00000513715 387 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC010342.1-201ENST00000514047 877 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 RNA5SP143-201ENST00000516936 115 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 NARSP2-201ENST00000518524 679 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC135001.1-201ENST00000544546 283 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms