Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC003001.2-201ENST00000616294 831 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.85□□□□□ -1.63
GABPAQ06546 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.85□□□□□ -1.63
GABPAQ06546 AC027290.2-201ENST00000623210 18662 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GABPAQ06546 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.84□□□□□ -1.63
GABPAQ06546 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.84□□□□□ -1.63
GABPAQ06546 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.84□□□□□ -1.63
GABPAQ06546 AC092162.3-201ENST00000624511 1624 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.84□□□□□ -1.63
GABPAQ06546 SCN1A-220ENST00000641603 12506 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 AL589826.1-201ENST00000340697 249 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 AC067945.1-201ENST00000342609 618 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 RNU1-15P-201ENST00000353977 144 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 SNORA27.3-201ENST00000364937 134 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
GABPAQ06546 RN7SKP97-201ENST00000410966 333 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.84□□□□□ -1.63
GABPAQ06546 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
GABPAQ06546 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.84□□□□□ -1.63
GABPAQ06546 AL591623.2-201ENST00000449978 222 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 PSMC1P13-201ENST00000458195 985 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.84□□□□□ -1.63
GABPAQ06546 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GABPAQ06546 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
GABPAQ06546 BTG4P1-201ENST00000510421 183 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.84□□□□□ -1.63
GABPAQ06546 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.84□□□□□ -1.63
GABPAQ06546 MTND1P6-201ENST00000523621 946 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.84□□□□□ -1.63
GABPAQ06546 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.84□□□□□ -1.63
GABPAQ06546 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.84□□□□□ -1.63
GABPAQ06546 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GABPAQ06546 SNX6P1-201ENST00000601728 1224 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 AC074276.2-201ENST00000619891 348 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 AC138907.10-201ENST00000623708 983 ntBASIC4.84□□□□□ -1.63
GABPAQ06546 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.84□□□□□ -1.63
GABPAQ06546 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.84□□□□□ -1.63
GABPAQ06546 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GABPAQ06546 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.84□□□□□ -1.63
GABPAQ06546 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
GABPAQ06546 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.84□□□□□ -1.63
GABPAQ06546 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
GABPAQ06546 AC107021.2-201ENST00000567714 2095 ntBASIC4.84□□□□□ -1.64
GABPAQ06546 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.84□□□□□ -1.64
GABPAQ06546 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.83□□□□□ -1.64
GABPAQ06546 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.83□□□□□ -1.64
GABPAQ06546 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.83□□□□□ -1.64
GABPAQ06546 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 RNU6-729P-201ENST00000384399 107 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 RNA5SP372-201ENST00000390836 115 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.83□□□□□ -1.64
GABPAQ06546 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.83□□□□□ -1.64
GABPAQ06546 MTND4LP13-201ENST00000425022 298 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 AC073335.1-201ENST00000427776 363 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.83□□□□□ -1.64
GABPAQ06546 TBCAP1-201ENST00000436520 327 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 ARL4AP3-201ENST00000441452 574 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 BTBD7P2-201ENST00000441962 620 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 VN1R48P-201ENST00000448149 1036 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 AC002553.2-201ENST00000453217 340 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.83□□□□□ -1.64
GABPAQ06546 AC069277.2-201ENST00000454211 432 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 AC107015.1-201ENST00000466902 747 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.83□□□□□ -1.64
GABPAQ06546 AC010460.1-201ENST00000507087 466 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 FABP5P6-201ENST00000510588 409 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 OR10D4P-201ENST00000525892 951 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.83□□□□□ -1.64
GABPAQ06546 SETP1-201ENST00000556014 845 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.83□□□□□ -1.64
GABPAQ06546 MIR1254-2-201ENST00000579553 63 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.83□□□□□ -1.64
GABPAQ06546 MIMT1-201ENST00000597105 1050 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 AC019080.5-201ENST00000624891 757 ntBASIC4.83□□□□□ -1.64
GABPAQ06546 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.83□□□□□ -1.64
GABPAQ06546 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GABPAQ06546 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms