Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.8□□□□□ -1.64
RAE1P78406 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 AL445523.1-201ENST00000451184 1362 ntBASIC4.79□□□□□ -1.64
RAE1P78406 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.79□□□□□ -1.64
RAE1P78406 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAE1P78406 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAE1P78406 IL6STP1-201ENST00000346911 1020 ntBASIC4.79□□□□□ -1.64
RAE1P78406 RNU6-553P-201ENST00000364047 96 ntBASIC4.79□□□□□ -1.64
RAE1P78406 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 AL161909.1-201ENST00000397390 712 ntBASIC4.79□□□□□ -1.64
RAE1P78406 MIR1286-201ENST00000408112 78 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 AC019050.1-201ENST00000418508 492 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC016907.1-201ENST00000419483 435 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC079355.1-201ENST00000421770 223 ntBASIC4.79□□□□□ -1.64
RAE1P78406 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 Z93242.1-201ENST00000427102 353 ntBASIC4.79□□□□□ -1.64
RAE1P78406 DYNLL1P7-201ENST00000429273 258 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC093155.1-201ENST00000440164 826 ntBASIC4.79□□□□□ -1.64
RAE1P78406 RPL34P20-201ENST00000442771 351 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 KNOP1P3-201ENST00000446933 426 ntBASIC4.79□□□□□ -1.64
RAE1P78406 TCEA1P1-201ENST00000449716 880 ntBASIC4.79□□□□□ -1.64
RAE1P78406 FAR2P1-206ENST00000449736 709 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 AC097262.1-201ENST00000452559 548 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC073387.1-201ENST00000453261 709 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AL389915.2-201ENST00000454576 441 ntBASIC4.79□□□□□ -1.64
RAE1P78406 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.79□□□□□ -1.64
RAE1P78406 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 AC010350.1-201ENST00000504908 231 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 TCP11X3P-202ENST00000514289 1254 ntBASIC4.79□□□□□ -1.64
RAE1P78406 RNU6-1225P-201ENST00000516336 65 ntBASIC4.79□□□□□ -1.64
RAE1P78406 RNA5SP135-201ENST00000517019 125 ntBASIC4.79□□□□□ -1.64
RAE1P78406 RN7SKP283-201ENST00000517197 270 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
RAE1P78406 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 AC084824.1-201ENST00000550917 1005 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.79□□□□□ -1.64
RAE1P78406 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 DPRXP4-201ENST00000578053 568 ntBASIC4.79□□□□□ -1.64
RAE1P78406 OR4K7P-201ENST00000580232 945 ntBASIC4.79□□□□□ -1.64
RAE1P78406 MIR3176-201ENST00000582210 90 ntBASIC4.79□□□□□ -1.64
RAE1P78406 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 AL137072.1-201ENST00000603444 466 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC131235.4-201ENST00000609288 620 ntBASIC4.79□□□□□ -1.64
RAE1P78406 Z95327.3-201ENST00000610385 572 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AL139418.1-201ENST00000613613 177 ntBASIC4.79□□□□□ -1.64
RAE1P78406 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC037198.3-201ENST00000616754 526 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AL359757.1-201ENST00000623176 255 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC099494.2-201ENST00000623371 978 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC112198.2-201ENST00000426589 6996 ntBASIC4.79□□□□□ -1.64
RAE1P78406 AC022031.1-201ENST00000585985 2593 ntBASIC4.79□□□□□ -1.64
RAE1P78406 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RAE1P78406 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAE1P78406 PABPC1P6-201ENST00000445594 1829 ntBASIC4.79□□□□□ -1.64
RAE1P78406 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RAE1P78406 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 AL672167.1-204ENST00000641875 3017 ntBASIC4.78□□□□□ -1.64
RAE1P78406 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms