Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CKS1BP61024 RAD1P1-201ENST00000231383 813 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CKS1BP61024 RNU4-4P-201ENST00000364588 130 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 MT-TP-201ENST00000387461 68 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CKS1BP61024 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.02□□□□□ -1.93
CKS1BP61024 AC140479.3-201ENST00000418944 1126 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.02□□□□□ -1.93
CKS1BP61024 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
CKS1BP61024 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.02□□□□□ -1.93
CKS1BP61024 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 NEK4P1-201ENST00000433383 879 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AC016831.4-201ENST00000438302 307 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 CNOT7P2-201ENST00000441051 832 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.02□□□□□ -1.93
CKS1BP61024 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 AC239367.2-201ENST00000447309 705 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 CALM1P2-201ENST00000452941 448 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 DDX39BP2-208ENST00000453923 258 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AL356390.1-201ENST00000455684 397 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AC010468.1-201ENST00000461022 817 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AC092754.2-201ENST00000463506 460 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 COPS8P2-201ENST00000473228 627 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 PHBP14-201ENST00000512887 367 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AC005798.1-201ENST00000513715 387 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 IGLVIV-64-201ENST00000518581 301 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 IGLV2-28-201ENST00000520681 304 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.02□□□□□ -1.93
CKS1BP61024 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.02□□□□□ -1.93
CKS1BP61024 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 MORF4L1P3-201ENST00000525966 950 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.02□□□□□ -1.93
CKS1BP61024 AC016180.1-201ENST00000567945 403 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 MIR3691-201ENST00000578066 90 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.02□□□□□ -1.93
CKS1BP61024 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 KPNA2P3-201ENST00000584190 848 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.02□□□□□ -1.93
CKS1BP61024 BPIFA4P-203ENST00000603168 689 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 LLPHP1-201ENST00000603571 367 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 SUMO2P15-201ENST00000604285 278 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CKS1BP61024 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 AP002799.1-201ENST00000623552 423 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 U3.53-201ENST00000628922 216 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 MIR7153-201ENST00000637758 57 ntBASIC3.02□□□□□ -1.93
CKS1BP61024 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.02□□□□□ -1.93
CKS1BP61024 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CKS1BP61024 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CKS1BP61024 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.02□□□□□ -1.93
CKS1BP61024 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CKS1BP61024 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CKS1BP61024 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 NCAPGP1-201ENST00000505112 1814 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CKS1BP61024 RN7SKP95-201ENST00000362860 303 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 RNA5SP435-201ENST00000364044 108 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 RNA5SP189-201ENST00000364920 115 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CKS1BP61024 SNORA48.8-201ENST00000391324 134 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 SDHCP2-201ENST00000398565 501 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AL391361.1-201ENST00000405580 489 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 RN7SKP222-201ENST00000410651 315 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 NRBF2P3-201ENST00000432731 865 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.01□□□□□ -1.93
CKS1BP61024 CBX1P4-201ENST00000439415 457 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AL353898.1-201ENST00000444055 238 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 CEACAMP7-201ENST00000444105 496 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AC012671.1-201ENST00000451912 203 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC006463.2-201ENST00000473326 348 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 RPS27AP16-201ENST00000492222 470 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.01□□□□□ -1.93
CKS1BP61024 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
CKS1BP61024 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 RPL12P22-201ENST00000519073 490 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC025423.2-201ENST00000537570 439 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.01□□□□□ -1.93
CKS1BP61024 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.01□□□□□ -1.93
CKS1BP61024 MIR1269B-201ENST00000580405 75 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.01□□□□□ -1.93
CKS1BP61024 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.01□□□□□ -1.93
CKS1BP61024 AC234771.5-201ENST00000600161 514 ntBASIC3.01□□□□□ -1.93
CKS1BP61024 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.01□□□□□ -1.93
CKS1BP61024 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CKS1BP61024 AC011816.2-201ENST00000607089 556 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms