Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 EI24P3-201ENST00000399046 1062 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 DBIP1-201ENST00000401435 260 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 RNA5SP487-201ENST00000410186 122 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.95□□□□□ -1.62
SUMO3P55854 AC012519.1-201ENST00000424588 610 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 NIPA2P1-201ENST00000426223 976 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RPS27AP6-201ENST00000427962 448 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 RPL12P46-201ENST00000436610 195 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RPL12P18-201ENST00000437175 325 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 GSTA7P-201ENST00000438425 448 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AC105402.2-201ENST00000438503 358 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RPS11P7-201ENST00000442125 465 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.95□□□□□ -1.62
SUMO3P55854 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 GAPDHP25-201ENST00000447061 1001 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AC009961.3-201ENST00000449832 765 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
SUMO3P55854 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.95□□□□□ -1.62
SUMO3P55854 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 RNU6-583P-201ENST00000516012 92 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 NPM1P6-201ENST00000521088 871 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 IGKV3D-34-201ENST00000522638 302 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.95□□□□□ -1.62
SUMO3P55854 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 OR4A12P-201ENST00000530847 918 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 CYCSP28-201ENST00000534284 321 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.95□□□□□ -1.62
SUMO3P55854 AL389895.1-201ENST00000554127 252 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AP005403.1-201ENST00000579720 229 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 AL589674.2-201ENST00000604304 337 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AL031667.3-201ENST00000620124 655 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RNU6-156P-201ENST00000621869 107 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AC007494.3-201ENST00000624660 743 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.95□□□□□ -1.62
SUMO3P55854 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 CYP1D1P-201ENST00000416662 1433 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SUMO3P55854 GVINP1-202ENST00000531871 7271 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 LINC00561-201ENST00000565815 2738 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 AC015799.1-201ENST00000622996 3122 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC117529.2-201ENST00000512159 2068 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 SNRPEP3-201ENST00000338402 276 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 RNU6-500P-201ENST00000362349 107 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 Y_RNA.18-201ENST00000362461 102 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 RN7SKP69-201ENST00000365390 305 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 MIR649-201ENST00000384843 97 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 SNORA48.4-201ENST00000391089 134 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AL021407.1-201ENST00000404531 386 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 RPS3AP9-201ENST00000417027 792 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.94□□□□□ -1.62
SUMO3P55854 SRSF1P1-201ENST00000424058 520 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC234779.1-201ENST00000425910 285 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 VN1R108P-201ENST00000431580 830 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AL389925.1-201ENST00000432257 728 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 GSTM5P1-201ENST00000434751 660 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 AL390119.1-201ENST00000440329 312 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC016772.1-201ENST00000444170 1261 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 RPL26P28-201ENST00000451325 435 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 MTCO3P2-201ENST00000457365 171 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms