Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC104687.2-201ENST00000604442 342 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AL133507.1-201ENST00000605269 557 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AL512329.2-201ENST00000607350 548 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC126915.2-201ENST00000610957 190 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC105227.2-201ENST00000615075 605 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC099494.2-201ENST00000623371 978 ntBASIC4.57□□□□□ -1.68
CDH12P55289 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
CDH12P55289 MAPK10-320ENST00000641462 6696 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AP005901.5-201ENST00000545779 1796 ntBASIC4.57□□□□□ -1.68
CDH12P55289 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH12P55289 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH12P55289 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 HSPA8P17-201ENST00000427029 1382 ntBASIC4.56□□□□□ -1.68
CDH12P55289 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CDH12P55289 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH12P55289 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH12P55289 RAP1BP1-201ENST00000412709 553 ntBASIC4.56□□□□□ -1.68
CDH12P55289 RGS17P1-201ENST00000423358 553 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH12P55289 AL009174.1-201ENST00000426577 416 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH12P55289 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH12P55289 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH12P55289 NMNAT1P2-201ENST00000435192 860 ntBASIC4.56□□□□□ -1.68
CDH12P55289 GTF2IP7-202ENST00000436677 309 ntBASIC4.56□□□□□ -1.68
CDH12P55289 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 KNOP1P3-201ENST00000446933 426 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AL354714.3-201ENST00000447284 493 ntBASIC4.56□□□□□ -1.68
CDH12P55289 TCEA1P1-201ENST00000449716 880 ntBASIC4.56□□□□□ -1.68
CDH12P55289 IGHV5-78-201ENST00000450948 295 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH12P55289 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 RN7SL517P-201ENST00000462240 305 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH12P55289 BET1P1-201ENST00000482276 359 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH12P55289 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 MRPS33P3-201ENST00000513456 322 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH12P55289 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH12P55289 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 AC087373.1-201ENST00000524920 491 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH12P55289 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 AC012146.2-201ENST00000576545 416 ntBASIC4.56□□□□□ -1.68
CDH12P55289 MIR3912-201ENST00000577566 105 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH12P55289 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 AC011445.2-201ENST00000599274 173 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 MRPS35P3-201ENST00000603189 709 ntBASIC4.56□□□□□ -1.68
CDH12P55289 RNF138P2-201ENST00000603490 592 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC105254.2-201ENST00000603636 436 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC018638.7-201ENST00000605836 1114 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC080013.6-201ENST00000606185 215 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC080013.3-201ENST00000606839 578 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AL049794.2-201ENST00000616301 365 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC004943.3-201ENST00000624116 600 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC015726.3-201ENST00000624501 418 ntBASIC4.56□□□□□ -1.68
CDH12P55289 AC092608.3-201ENST00000625017 386 ntBASIC4.56□□□□□ -1.68
CDH12P55289 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 AL034370.1-201ENST00000397254 1590 ntBASIC4.56□□□□□ -1.68
CDH12P55289 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH12P55289 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH12P55289 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH12P55289 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH12P55289 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH12P55289 AL359922.3-201ENST00000624779 1670 ntBASIC4.55□□□□□ -1.68
CDH12P55289 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 AL672167.1-203ENST00000641299 2975 ntBASIC4.55□□□□□ -1.68
CDH12P55289 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 Y_RNA.192-201ENST00000363977 102 ntBASIC4.55□□□□□ -1.68
CDH12P55289 MIR1286-201ENST00000408112 78 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 RPL12P11-201ENST00000439970 501 ntBASIC4.55□□□□□ -1.68
CDH12P55289 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms