Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH4P55283 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CDH4P55283 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH4P55283 AC090953.1-201ENST00000604305 1092 ntBASIC4.36□□□□□ -1.71
CDH4P55283 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH4P55283 OR52H1-202ENST00000641796 1061 ntBASIC4.36□□□□□ -1.71
CDH4P55283 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH4P55283 LARP1BP1-201ENST00000506036 1359 ntBASIC4.36□□□□□ -1.71
CDH4P55283 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH4P55283 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH4P55283 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH4P55283 AC114546.3-201ENST00000623582 1734 ntBASIC4.35□□□□□ -1.71
CDH4P55283 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH4P55283 AC009229.4-201ENST00000623854 1947 ntBASIC4.35□□□□□ -1.71
CDH4P55283 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 AC067945.1-201ENST00000342609 618 ntBASIC4.35□□□□□ -1.71
CDH4P55283 RNU1-15P-201ENST00000353977 144 ntBASIC4.35□□□□□ -1.71
CDH4P55283 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH4P55283 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 RNU6-146P-201ENST00000384602 108 ntBASIC4.35□□□□□ -1.71
CDH4P55283 MIR1179-201ENST00000408703 91 ntBASIC4.35□□□□□ -1.71
CDH4P55283 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH4P55283 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH4P55283 AC073464.3-201ENST00000422564 712 ntBASIC4.35□□□□□ -1.71
CDH4P55283 RSL24D1P6-201ENST00000426934 401 ntBASIC4.35□□□□□ -1.71
CDH4P55283 SKP1P3-201ENST00000429280 487 ntBASIC4.35□□□□□ -1.71
CDH4P55283 COX6B1P7-201ENST00000430845 235 ntBASIC4.35□□□□□ -1.71
CDH4P55283 AC091390.1-201ENST00000433904 331 ntBASIC4.35□□□□□ -1.71
CDH4P55283 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH4P55283 FGF7P3-201ENST00000454645 303 ntBASIC4.35□□□□□ -1.71
CDH4P55283 AC005912.1-201ENST00000495392 255 ntBASIC4.35□□□□□ -1.71
CDH4P55283 BNIP3P41-201ENST00000503774 571 ntBASIC4.35□□□□□ -1.71
CDH4P55283 ACTR6P1-201ENST00000514311 1104 ntBASIC4.35□□□□□ -1.71
CDH4P55283 SNORA31.9-201ENST00000516429 84 ntBASIC4.35□□□□□ -1.71
CDH4P55283 MRPL49P2-201ENST00000521066 465 ntBASIC4.35□□□□□ -1.71
CDH4P55283 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH4P55283 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CDH4P55283 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH4P55283 AC068446.3-201ENST00000555285 382 ntBASIC4.35□□□□□ -1.71
CDH4P55283 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH4P55283 AP001542.1-201ENST00000591314 200 ntBASIC4.35□□□□□ -1.71
CDH4P55283 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 uc_338.9-201ENST00000617424 182 ntBASIC4.35□□□□□ -1.71
CDH4P55283 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH4P55283 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH4P55283 OR5AC4P-202ENST00000642086 985 ntBASIC4.35□□□□□ -1.71
CDH4P55283 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH4P55283 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH4P55283 AC012020.1-201ENST00000624541 1728 ntBASIC4.35□□□□□ -1.71
CDH4P55283 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH4P55283 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH4P55283 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH4P55283 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
CDH4P55283 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH4P55283 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH4P55283 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH4P55283 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH4P55283 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH4P55283 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDH4P55283 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH4P55283 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDH4P55283 IL6STP1-201ENST00000346911 1020 ntBASIC4.34□□□□□ -1.71
CDH4P55283 RNU6-666P-201ENST00000363499 107 ntBASIC4.34□□□□□ -1.71
CDH4P55283 RNU6-244P-201ENST00000391028 104 ntBASIC4.34□□□□□ -1.71
CDH4P55283 HDGFP1-201ENST00000405943 252 ntBASIC4.34□□□□□ -1.71
CDH4P55283 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH4P55283 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH4P55283 PDSS1P1-201ENST00000422953 1114 ntBASIC4.34□□□□□ -1.71
CDH4P55283 UBE2V2P3-201ENST00000433562 437 ntBASIC4.34□□□□□ -1.71
CDH4P55283 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH4P55283 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH4P55283 RPL23AP46-201ENST00000438548 490 ntBASIC4.34□□□□□ -1.71
CDH4P55283 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH4P55283 AL157827.1-201ENST00000447622 132 ntBASIC4.34□□□□□ -1.71
CDH4P55283 RNU7-27P-201ENST00000459281 62 ntBASIC4.34□□□□□ -1.71
CDH4P55283 RPS29P19-201ENST00000479709 171 ntBASIC4.34□□□□□ -1.71
CDH4P55283 RPS27AP13-201ENST00000498403 237 ntBASIC4.34□□□□□ -1.71
CDH4P55283 AC108145.1-201ENST00000503770 153 ntBASIC4.34□□□□□ -1.71
CDH4P55283 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH4P55283 RNU6-1308P-201ENST00000516817 103 ntBASIC4.34□□□□□ -1.71
CDH4P55283 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH4P55283 AC104997.1-201ENST00000519761 717 ntBASIC4.34□□□□□ -1.71
CDH4P55283 AC090819.1-201ENST00000523800 1111 ntBASIC4.34□□□□□ -1.71
CDH4P55283 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH4P55283 AC105233.3-201ENST00000531125 744 ntBASIC4.34□□□□□ -1.71
CDH4P55283 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH4P55283 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH4P55283 AC006116.5-201ENST00000591936 559 ntBASIC4.34□□□□□ -1.71
CDH4P55283 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH4P55283 AC026979.4-201ENST00000606555 645 ntBASIC4.34□□□□□ -1.71
CDH4P55283 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH4P55283 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDH4P55283 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms