Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP98P52948 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP98P52948 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP98P52948 HSPD1P15-201ENST00000505573 1122 ntBASIC4.77□□□□□ -1.65
NUP98P52948 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP98P52948 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP98P52948 MIR3944-201ENST00000581277 108 ntBASIC4.77□□□□□ -1.65
NUP98P52948 MIR3922-201ENST00000585192 84 ntBASIC4.77□□□□□ -1.65
NUP98P52948 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP98P52948 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP98P52948 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP98P52948 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP98P52948 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP98P52948 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP98P52948 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NUP98P52948 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP98P52948 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP98P52948 AC010266.2-201ENST00000564741 3255 ntBASIC4.77□□□□□ -1.65
NUP98P52948 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.76□□□□□ -1.65
NUP98P52948 Y_RNA.333-201ENST00000365274 102 ntBASIC4.76□□□□□ -1.65
NUP98P52948 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NUP98P52948 RNA5SP306-201ENST00000411087 107 ntBASIC4.76□□□□□ -1.65
NUP98P52948 SNORA74D-201ENST00000516404 141 ntBASIC4.76□□□□□ -1.65
NUP98P52948 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP98P52948 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP98P52948 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP98P52948 AC005412.1-201ENST00000580812 1049 ntBASIC4.76□□□□□ -1.65
NUP98P52948 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP98P52948 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NUP98P52948 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP98P52948 HCFC2P1-201ENST00000392864 1592 ntBASIC4.76□□□□□ -1.65
NUP98P52948 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP98P52948 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP98P52948 RPL7P60-201ENST00000397636 735 ntBASIC4.76□□□□□ -1.65
NUP98P52948 RPL7AP73-201ENST00000413490 353 ntBASIC4.76□□□□□ -1.65
NUP98P52948 CRYBB2P1-203ENST00000415709 538 ntBASIC4.76□□□□□ -1.65
NUP98P52948 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.76□□□□□ -1.65
NUP98P52948 AC087650.1-201ENST00000431445 468 ntBASIC4.76□□□□□ -1.65
NUP98P52948 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP98P52948 SETP14-201ENST00000497538 873 ntBASIC4.76□□□□□ -1.65
NUP98P52948 MTND6P33-201ENST00000571794 183 ntBASIC4.76□□□□□ -1.65
NUP98P52948 AC026368.1-201ENST00000614934 690 ntBASIC4.76□□□□□ -1.65
NUP98P52948 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP98P52948 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP98P52948 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 ATP5A1P2-201ENST00000412323 255 ntBASIC4.75□□□□□ -1.65
NUP98P52948 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 RPS3AP12-201ENST00000443616 753 ntBASIC4.75□□□□□ -1.65
NUP98P52948 AC084198.1-201ENST00000477747 402 ntBASIC4.75□□□□□ -1.65
NUP98P52948 RAC1P2-201ENST00000511164 579 ntBASIC4.75□□□□□ -1.65
NUP98P52948 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP98P52948 RNA5SP208-201ENST00000516156 78 ntBASIC4.75□□□□□ -1.65
NUP98P52948 SNORA70.18-201ENST00000516696 98 ntBASIC4.75□□□□□ -1.65
NUP98P52948 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP98P52948 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP98P52948 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP98P52948 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP98P52948 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP98P52948 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
NUP98P52948 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP98P52948 U3.23-201ENST00000391132 200 ntBASIC4.74□□□□□ -1.65
NUP98P52948 ZNF602P-201ENST00000405929 924 ntBASIC4.74□□□□□ -1.65
NUP98P52948 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP98P52948 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP98P52948 RPL21P11-201ENST00000461458 483 ntBASIC4.74□□□□□ -1.65
NUP98P52948 ARL4AP1-201ENST00000503220 705 ntBASIC4.74□□□□□ -1.65
NUP98P52948 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP98P52948 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP98P52948 IGKV2-38-201ENST00000517443 247 ntBASIC4.74□□□□□ -1.65
NUP98P52948 OR7E13P-201ENST00000526052 910 ntBASIC4.74□□□□□ -1.65
NUP98P52948 DEFB109D-201ENST00000529497 240 ntBASIC4.74□□□□□ -1.65
NUP98P52948 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP98P52948 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.74□□□□□ -1.65
NUP98P52948 AL355365.1-201ENST00000616480 294 ntBASIC4.74□□□□□ -1.65
NUP98P52948 MIR7975-201ENST00000619350 68 ntBASIC4.74□□□□□ -1.65
NUP98P52948 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NUP98P52948 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP98P52948 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
NUP98P52948 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
NUP98P52948 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP98P52948 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUP98P52948 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NUP98P52948 RN7SKP74-201ENST00000362849 309 ntBASIC4.74□□□□□ -1.65
NUP98P52948 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NUP98P52948 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NUP98P52948 RPL21P23-201ENST00000446654 460 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms