Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC005962.2-201ENST00000611427 652 ntBASIC4.67□□□□□ -1.66
LHX1P48742 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LHX1P48742 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LHX1P48742 AC007546.2-201ENST00000623996 360 ntBASIC4.67□□□□□ -1.66
LHX1P48742 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX1P48742 EOGT-210ENST00000615922 1931 ntBASIC4.67□□□□□ -1.66
LHX1P48742 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.67□□□□□ -1.66
LHX1P48742 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.67□□□□□ -1.66
LHX1P48742 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.67□□□□□ -1.66
LHX1P48742 AC008432.1-201ENST00000615912 1320 ntBASIC4.67□□□□□ -1.66
LHX1P48742 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LHX1P48742 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LHX1P48742 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LHX1P48742 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX1P48742 AC048351.1-201ENST00000420064 602 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX1P48742 MTCO3P21-201ENST00000430791 643 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX1P48742 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX1P48742 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX1P48742 RPL6P5-201ENST00000445678 828 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AL589765.3-201ENST00000446084 462 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC243772.1-201ENST00000451620 410 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC109327.1-201ENST00000471666 403 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC083829.1-201ENST00000503756 657 ntBASIC4.66□□□□□ -1.66
LHX1P48742 MTND3P3-201ENST00000505004 126 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX1P48742 AC121161.1-201ENST00000510606 652 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX1P48742 RN7SKP122-201ENST00000515923 296 ntBASIC4.66□□□□□ -1.66
LHX1P48742 OR5BC1P-201ENST00000529327 739 ntBASIC4.66□□□□□ -1.66
LHX1P48742 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX1P48742 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX1P48742 DNAJC19P3-201ENST00000594491 331 ntBASIC4.66□□□□□ -1.66
LHX1P48742 ABI1P1-201ENST00000603375 1120 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC010201.1-201ENST00000605051 540 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.66□□□□□ -1.66
LHX1P48742 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LHX1P48742 AL021997.2-201ENST00000615674 271 ntBASIC4.66□□□□□ -1.66
LHX1P48742 uc_338.9-201ENST00000617424 182 ntBASIC4.66□□□□□ -1.66
LHX1P48742 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX1P48742 MIR6830-201ENST00000636015 70 ntBASIC4.66□□□□□ -1.66
LHX1P48742 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 AP000756.2-201ENST00000624168 2567 ntBASIC4.66□□□□□ -1.66
LHX1P48742 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX1P48742 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.66□□□□□ -1.66
LHX1P48742 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX1P48742 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX1P48742 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX1P48742 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX1P48742 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.65□□□□□ -1.66
LHX1P48742 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LHX1P48742 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.65□□□□□ -1.66
LHX1P48742 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX1P48742 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX1P48742 RNA5SP175-201ENST00000364275 119 ntBASIC4.65□□□□□ -1.67
LHX1P48742 SNORA70.2-201ENST00000364506 135 ntBASIC4.65□□□□□ -1.67
LHX1P48742 SNORA62.2-201ENST00000364672 152 ntBASIC4.65□□□□□ -1.67
LHX1P48742 RNA5SP366-201ENST00000365454 123 ntBASIC4.65□□□□□ -1.67
LHX1P48742 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 AC068538.1-201ENST00000376856 336 ntBASIC4.65□□□□□ -1.67
LHX1P48742 RNU1-44P-201ENST00000384453 163 ntBASIC4.65□□□□□ -1.67
LHX1P48742 OR6C69P-201ENST00000394268 893 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AL359643.1-201ENST00000404109 423 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AL078604.1-201ENST00000404609 466 ntBASIC4.65□□□□□ -1.67
LHX1P48742 ATF1P1-201ENST00000406040 927 ntBASIC4.65□□□□□ -1.67
LHX1P48742 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 LINC01881-201ENST00000416103 412 ntBASIC4.65□□□□□ -1.67
LHX1P48742 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.65□□□□□ -1.67
LHX1P48742 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 AC005189.1-201ENST00000431286 310 ntBASIC4.65□□□□□ -1.67
LHX1P48742 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 RPS3AP54-201ENST00000435535 734 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AL158053.1-201ENST00000441503 453 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AL512326.1-201ENST00000443050 721 ntBASIC4.65□□□□□ -1.67
LHX1P48742 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 ATP5G1P3-201ENST00000463301 410 ntBASIC4.65□□□□□ -1.67
LHX1P48742 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 RNA5SP464-201ENST00000516251 108 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.65□□□□□ -1.67
LHX1P48742 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.65□□□□□ -1.67
LHX1P48742 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 AC023575.1-201ENST00000580510 358 ntBASIC4.65□□□□□ -1.67
LHX1P48742 MIR4697-201ENST00000582977 78 ntBASIC4.65□□□□□ -1.67
LHX1P48742 MIR3138-201ENST00000585238 82 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms