Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD4P46934 RNA5SP479-201ENST00000364858 117 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 SNORA27.3-201ENST00000364937 134 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 ENSAP1-201ENST00000392855 326 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 ATP5F1P2-201ENST00000398143 760 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AL121834.1-202ENST00000404494 277 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 USP9YP19-201ENST00000412165 485 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC019070.1-201ENST00000415008 1024 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD4P46934 MTND2P11-201ENST00000423638 648 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC115285.1-201ENST00000424879 736 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 FAR1P1-201ENST00000427163 934 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 EIF2S2P3-201ENST00000428356 999 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD4P46934 TBCAP1-201ENST00000436520 327 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD4P46934 SNRPFP2-201ENST00000440710 251 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 MTND5P8-201ENST00000449817 1083 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD4P46934 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.82□□□□□ -1.64
NEDD4P46934 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.82□□□□□ -1.64
NEDD4P46934 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD4P46934 PCNAP1-201ENST00000505363 709 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC108157.1-201ENST00000510511 539 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.82□□□□□ -1.64
NEDD4P46934 RN7SKP21-201ENST00000516503 220 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD4P46934 DYNLL1P4-201ENST00000549314 266 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD4P46934 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.82□□□□□ -1.64
NEDD4P46934 AC079171.1-201ENST00000568788 914 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NEDD4P46934 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD4P46934 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD4P46934 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD4P46934 AC012213.4-201ENST00000606457 354 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 AC095038.2-201ENST00000621464 1070 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 RNA5SP196-201ENST00000625967 102 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NEDD4P46934 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD4P46934 AC011503.2-201ENST00000594230 1500 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 SAMMSON-213ENST00000641336 1521 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD4P46934 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD4P46934 KPNA2P2-201ENST00000419546 1489 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.82□□□□□ -1.64
NEDD4P46934 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD4P46934 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD4P46934 AC245100.2-201ENST00000454544 1679 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NEDD4P46934 SPRR2C-201ENST00000290702 219 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 SNORD74.4-201ENST00000364129 80 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 RNA5SP515-201ENST00000364570 118 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 RNA5SP513-201ENST00000364648 118 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 RNF19BPX-201ENST00000426224 625 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.81□□□□□ -1.64
NEDD4P46934 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD4P46934 BX119904.1-201ENST00000432026 348 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 BUD31P2-201ENST00000449374 300 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 RPL7P1-201ENST00000468161 747 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 RPL7P9-201ENST00000468715 747 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 RPL29P14-201ENST00000495837 428 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD4P46934 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.81□□□□□ -1.64
NEDD4P46934 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD4P46934 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD4P46934 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.81□□□□□ -1.64
NEDD4P46934 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD4P46934 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.81□□□□□ -1.64
NEDD4P46934 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.81□□□□□ -1.64
NEDD4P46934 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD4P46934 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 AC012603.1-201ENST00000606424 528 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 RNU4-89P-201ENST00000607443 133 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 AL731566.2-201ENST00000618971 317 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 AC074276.2-201ENST00000619891 348 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 LINC00216-201ENST00000623548 1126 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD4P46934 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD4P46934 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 AC015813.6-201ENST00000624409 5808 ntBASIC4.81□□□□□ -1.64
NEDD4P46934 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD4P46934 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD4P46934 AL356317.1-201ENST00000396110 1436 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NEDD4P46934 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD4P46934 OR13C3-201ENST00000374781 1108 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 RNU4-6P-201ENST00000410804 122 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 RNA5SP306-201ENST00000411087 107 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 AC108032.1-201ENST00000416706 207 ntBASIC4.8□□□□□ -1.64
NEDD4P46934 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD4P46934 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms