Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 IGLVIV-65-201ENST00000517313 360 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM23P36406 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM23P36406 IGKV2D-10-201ENST00000520194 281 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM23P36406 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.41□□□□□ -1.7
TRIM23P36406 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM23P36406 AC021483.2-201ENST00000567415 758 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM23P36406 MIR4697-201ENST00000582977 78 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 PSMA6P4-201ENST00000603247 718 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC079587.1-201ENST00000603846 277 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC012557.1-201ENST00000607115 611 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC020634.1-201ENST00000608701 549 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC005962.2-201ENST00000611427 652 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC011472.4-201ENST00000615848 491 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 MLECP1-201ENST00000615893 709 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC025016.1-201ENST00000616746 682 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC006338.2-201ENST00000616864 791 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 uc_338.9-201ENST00000617424 182 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 AC011944.2-201ENST00000624440 683 ntBASIC4.41□□□□□ -1.7
TRIM23P36406 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM23P36406 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
TRIM23P36406 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM23P36406 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM23P36406 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM23P36406 AC139769.1-204ENST00000472297 1931 ntBASIC4.4□□□□□ -1.7
TRIM23P36406 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM23P36406 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM23P36406 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM23P36406 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM23P36406 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM23P36406 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM23P36406 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM23P36406 MIR448-201ENST00000362131 111 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 RNA5SP513-201ENST00000364648 118 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM23P36406 SNORA11F-201ENST00000408237 128 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 RNU6-603P-201ENST00000411403 107 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM23P36406 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM23P36406 MTND4LP7-201ENST00000431728 294 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 MTND4P15-201ENST00000437913 1033 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 AC114495.1-201ENST00000441274 436 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM23P36406 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.4□□□□□ -1.71
TRIM23P36406 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM23P36406 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM23P36406 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM23P36406 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.4□□□□□ -1.71
TRIM23P36406 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM23P36406 RN7SKP122-201ENST00000515923 296 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM23P36406 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM23P36406 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM23P36406 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM23P36406 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.4□□□□□ -1.71
TRIM23P36406 AL049870.4-201ENST00000555741 486 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM23P36406 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM23P36406 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM23P36406 AC090181.2-201ENST00000602975 672 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 OR4H6P-202ENST00000603819 340 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM23P36406 AC008966.2-201ENST00000606157 453 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 AL355802.4-201ENST00000607635 548 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 AC097505.1-201ENST00000610199 565 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 uc_338.13-201ENST00000618243 179 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM23P36406 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM23P36406 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM23P36406 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM23P36406 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
TRIM23P36406 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM23P36406 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM23P36406 AL445437.1-201ENST00000623157 3087 ntBASIC4.4□□□□□ -1.71
TRIM23P36406 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRIM23P36406 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM23P36406 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM23P36406 AC011266.1-201ENST00000624119 3569 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM23P36406 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM23P36406 AC008033.1-201ENST00000216407 1162 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM23P36406 SNORA70.2-201ENST00000364506 135 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 RNA5SP151-201ENST00000365632 117 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM23P36406 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM23P36406 AC062016.2-201ENST00000420950 676 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 EIF4EP1-201ENST00000422311 642 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms