Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 OR1AB1P-201ENST00000585564 761 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 MTCO2P22-201ENST00000603246 681 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC034236.3-201ENST00000605999 461 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC020658.4-201ENST00000613987 684 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC083809.1-201ENST00000615051 472 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 AL023881.1-201ENST00000621088 301 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC019278.1-201ENST00000623516 479 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHMT2P34897 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 MIR6830-201ENST00000636015 70 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC119674.1-220ENST00000641502 1048 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHMT2P34897 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHMT2P34897 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SHMT2P34897 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SHMT2P34897 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHMT2P34897 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHMT2P34897 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SHMT2P34897 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHMT2P34897 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHMT2P34897 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SHMT2P34897 AL451142.2-201ENST00000429076 2090 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 FAM3C2-201ENST00000312214 681 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SHMT2P34897 RNA5SP502-201ENST00000362694 119 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AL133412.1-201ENST00000380194 2992 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AL583835.1-201ENST00000399570 407 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AL136131.1-201ENST00000406079 803 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AMZ2P2-201ENST00000406819 1057 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 MIR1179-201ENST00000408703 91 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 RNA5SP36-201ENST00000410197 133 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 RN7SKP235-201ENST00000410662 305 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 NRBF2P2-201ENST00000413087 861 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.14□□□□□ -1.75
SHMT2P34897 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.14□□□□□ -1.75
SHMT2P34897 RPL23AP38-201ENST00000423801 469 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 MTCO1P57-201ENST00000432182 261 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC007563.3-201ENST00000433233 371 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.14□□□□□ -1.75
SHMT2P34897 AL035551.1-201ENST00000446931 348 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.14□□□□□ -1.75
SHMT2P34897 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.14□□□□□ -1.75
SHMT2P34897 AC104306.1-201ENST00000449702 371 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 ABCF2P2-201ENST00000450549 296 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.14□□□□□ -1.75
SHMT2P34897 AC104629.2-201ENST00000468627 598 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC010618.1-201ENST00000469924 477 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC041039.1-201ENST00000485656 536 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.14□□□□□ -1.75
SHMT2P34897 PCNAP1-201ENST00000505363 709 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.14□□□□□ -1.75
SHMT2P34897 AC108475.1-201ENST00000507880 950 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 IGHV3-63-201ENST00000518422 341 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.14□□□□□ -1.75
SHMT2P34897 PHBP17-201ENST00000528576 541 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.14□□□□□ -1.75
SHMT2P34897 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.14□□□□□ -1.75
SHMT2P34897 AC074029.2-201ENST00000551045 634 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 MIR3939-201ENST00000582614 106 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC011477.5-201ENST00000586571 259 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHMT2P34897 ARF4P1-201ENST00000605447 541 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC073111.2-201ENST00000605657 1075 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.14□□□□□ -1.75
SHMT2P34897 AL445363.3-201ENST00000623080 671 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.14□□□□□ -1.75
SHMT2P34897 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHMT2P34897 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.14□□□□□ -1.75
SHMT2P34897 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
SHMT2P34897 Z73965.1-201ENST00000623412 2297 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 AC005261.4-201ENST00000600047 1385 ntBASIC4.14□□□□□ -1.75
SHMT2P34897 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.13□□□□□ -1.75
SHMT2P34897 ZNF962P-201ENST00000443465 3140 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SHMT2P34897 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.13□□□□□ -1.75
SHMT2P34897 USP9YP4-201ENST00000424401 1745 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHMT2P34897 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SHMT2P34897 SNORA70.2-201ENST00000364506 135 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.13□□□□□ -1.75
SHMT2P34897 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.13□□□□□ -1.75
SHMT2P34897 RNA5SP306-201ENST00000411087 107 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 AL161631.1-201ENST00000417933 486 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.13□□□□□ -1.75
SHMT2P34897 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.13□□□□□ -1.75
SHMT2P34897 AC234779.1-201ENST00000425910 285 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 NIPA2P1-201ENST00000426223 976 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 AL353597.2-202ENST00000434901 373 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 MTCYBP29-201ENST00000436327 1006 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 RPL23AP46-201ENST00000438548 490 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 ELOCP8-201ENST00000439309 332 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 ELOCP15-201ENST00000442090 332 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 AC099063.2-201ENST00000446360 662 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 NUTF2P3-201ENST00000448540 384 ntBASIC4.13□□□□□ -1.75
SHMT2P34897 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms