Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6-650P-201ENST00000365658 111 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AL590290.1-201ENST00000405336 380 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 UBE2V1P11-201ENST00000411559 285 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 MTCO3P4-201ENST00000419236 787 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
HOXC8P31273 KCTD10P1-201ENST00000434203 625 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 RPL12P46-201ENST00000436610 195 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 RPL23AP52-201ENST00000439311 478 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 CBX1P4-201ENST00000439415 457 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 RNF2P1-201ENST00000442955 1010 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AC097499.1-201ENST00000444277 208 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 AC108475.1-201ENST00000507880 950 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 SNORA76.2-201ENST00000517095 137 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 MTND1P6-201ENST00000523621 946 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 SMARCE1P4-201ENST00000523647 241 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.9□□□□□ -1.63
HOXC8P31273 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 AC068993.1-201ENST00000546724 589 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 POLR2KP1-201ENST00000553226 168 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC8P31273 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 VN1R85P-201ENST00000601587 426 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AL591034.3-201ENST00000605511 685 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 AC023043.4-201ENST00000612081 449 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC8P31273 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC8P31273 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC8P31273 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC8P31273 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HOXC8P31273 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC8P31273 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC8P31273 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.9□□□□□ -1.63
HOXC8P31273 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC8P31273 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC8P31273 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 AL451142.2-201ENST00000429076 2090 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 BMS1P3-201ENST00000372011 932 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 RNA5SP187-201ENST00000384400 119 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 SNORA37-201ENST00000384504 129 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AL161909.1-201ENST00000397390 712 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 PTGES3P2-201ENST00000407942 482 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC010385.1-201ENST00000412374 256 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 RPL17P36-201ENST00000420302 549 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AL158073.1-201ENST00000426848 1104 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 NPM1P24-201ENST00000428039 894 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 RPS20P1-201ENST00000434853 354 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC8P31273 AL353093.1-201ENST00000441292 436 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC8P31273 RPS20P4-201ENST00000461659 355 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC016550.1-201ENST00000505348 785 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AC008958.1-201ENST00000511047 682 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC027338.1-201ENST00000514840 825 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC8P31273 RNU6-513P-201ENST00000516104 104 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AP003102.1-201ENST00000525638 661 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 MTND5P21-201ENST00000531961 522 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC8P31273 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC8P31273 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AC106785.3-201ENST00000564064 847 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AC018552.3-201ENST00000567416 561 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 RN7SL176P-201ENST00000580352 264 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AC093227.2-201ENST00000589357 285 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 ZNF92P3-201ENST00000596594 954 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 BNIP3P31-201ENST00000604515 566 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AC079610.2-201ENST00000604818 690 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AC010200.2-201ENST00000605098 235 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC8P31273 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC8P31273 MIR8059-201ENST00000620427 81 ntBASIC4.89□□□□□ -1.63
HOXC8P31273 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC8P31273 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC8P31273 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HOXC8P31273 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC8P31273 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms