Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A5P29400 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL4A5P29400 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
COL4A5P29400 DBIP2-201ENST00000419076 262 ntBASIC4.58□□□□□ -1.68
COL4A5P29400 ATP5JP1-201ENST00000431631 322 ntBASIC4.58□□□□□ -1.68
COL4A5P29400 EIF4A1P11-201ENST00000451239 222 ntBASIC4.58□□□□□ -1.68
COL4A5P29400 MTND6P6-201ENST00000478031 263 ntBASIC4.58□□□□□ -1.68
COL4A5P29400 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A5P29400 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A5P29400 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A5P29400 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.58□□□□□ -1.68
COL4A5P29400 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.58□□□□□ -1.68
COL4A5P29400 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.58□□□□□ -1.68
COL4A5P29400 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.58□□□□□ -1.68
COL4A5P29400 AC022106.2-201ENST00000620114 757 ntBASIC4.58□□□□□ -1.68
COL4A5P29400 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A5P29400 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A5P29400 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL4A5P29400 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A5P29400 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A5P29400 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A5P29400 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A5P29400 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A5P29400 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
COL4A5P29400 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A5P29400 DDX18P6-201ENST00000450119 1997 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A5P29400 AC004448.2-201ENST00000422360 586 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 HMGN2P27-201ENST00000427352 270 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 AC092641.1-201ENST00000440229 772 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A5P29400 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A5P29400 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A5P29400 AL355365.1-201ENST00000616480 294 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL4A5P29400 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A5P29400 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A5P29400 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A5P29400 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A5P29400 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 HMGB1P37-201ENST00000439613 609 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.57□□□□□ -1.68
COL4A5P29400 RPL21P11-201ENST00000461458 483 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
COL4A5P29400 AC008694.2-201ENST00000517591 306 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.57□□□□□ -1.68
COL4A5P29400 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A5P29400 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A5P29400 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.57□□□□□ -1.68
COL4A5P29400 AC012493.2-201ENST00000595083 291 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.57□□□□□ -1.68
COL4A5P29400 SNORA62.6-201ENST00000606322 83 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 MIR8057-201ENST00000620957 69 ntBASIC4.57□□□□□ -1.68
COL4A5P29400 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A5P29400 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.57□□□□□ -1.68
COL4A5P29400 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.57□□□□□ -1.68
COL4A5P29400 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL4A5P29400 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
COL4A5P29400 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.56□□□□□ -1.68
COL4A5P29400 SAMMSON-213ENST00000641336 1521 ntBASIC4.56□□□□□ -1.68
COL4A5P29400 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A5P29400 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A5P29400 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A5P29400 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A5P29400 MIR1271-201ENST00000408537 86 ntBASIC4.56□□□□□ -1.68
COL4A5P29400 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL4A5P29400 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.56□□□□□ -1.68
COL4A5P29400 AC073063.1-201ENST00000434352 607 ntBASIC4.56□□□□□ -1.68
COL4A5P29400 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.56□□□□□ -1.68
COL4A5P29400 OR52Y1P-201ENST00000452418 828 ntBASIC4.56□□□□□ -1.68
COL4A5P29400 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.56□□□□□ -1.68
COL4A5P29400 AC012158.1-204ENST00000483430 465 ntBASIC4.56□□□□□ -1.68
COL4A5P29400 AC025554.1-201ENST00000505641 188 ntBASIC4.56□□□□□ -1.68
COL4A5P29400 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.56□□□□□ -1.68
COL4A5P29400 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.56□□□□□ -1.68
COL4A5P29400 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.56□□□□□ -1.68
COL4A5P29400 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A5P29400 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A5P29400 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.56□□□□□ -1.68
COL4A5P29400 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A5P29400 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL4A5P29400 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A5P29400 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 CDY11P-201ENST00000447168 1651 ntBASIC4.55□□□□□ -1.68
COL4A5P29400 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 SNORA3C-201ENST00000408792 125 ntBASIC4.55□□□□□ -1.68
COL4A5P29400 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.55□□□□□ -1.68
COL4A5P29400 RPL7AP73-201ENST00000413490 353 ntBASIC4.55□□□□□ -1.68
COL4A5P29400 RPL5P24-201ENST00000463742 885 ntBASIC4.55□□□□□ -1.68
COL4A5P29400 AC006511.1-201ENST00000470614 315 ntBASIC4.55□□□□□ -1.68
COL4A5P29400 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.55□□□□□ -1.68
COL4A5P29400 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.55□□□□□ -1.68
COL4A5P29400 AC097505.1-201ENST00000610199 565 ntBASIC4.55□□□□□ -1.68
COL4A5P29400 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms