Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL445991.1-201ENST00000450381 475 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 RN7SL39P-201ENST00000462264 297 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 RPS27AP17-201ENST00000463344 455 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.44□□□□□ -1.38
NFKB1P19838 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 GM2AP2-201ENST00000491764 562 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 Vault.3-201ENST00000516676 95 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.44□□□□□ -1.38
NFKB1P19838 AC087241.2-201ENST00000535801 324 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.44□□□□□ -1.38
NFKB1P19838 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.44□□□□□ -1.38
NFKB1P19838 MIR3668-201ENST00000582138 75 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 AC005332.4-201ENST00000592752 579 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AC011891.2-201ENST00000604949 397 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AC008966.2-201ENST00000606157 453 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.44□□□□□ -1.38
NFKB1P19838 AC068831.8-201ENST00000620171 435 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AC005899.6-201ENST00000620729 297 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 AL136984.1-201ENST00000607611 1893 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AC007114.2-201ENST00000576014 4281 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.43□□□□□ -1.38
NFKB1P19838 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC011504.1-201ENST00000623331 4103 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NFKB1P19838 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 MTND5P16-201ENST00000460269 1703 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NFKB1P19838 OR5J1P-201ENST00000313544 939 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NFKB1P19838 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NFKB1P19838 Y_RNA.384-201ENST00000383909 102 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AC068050.1-201ENST00000394891 380 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 RPL21P50-201ENST00000417698 477 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 AL606489.2-201ENST00000433886 234 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 RPL23AP19-201ENST00000436229 369 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 VPS25P1-201ENST00000455691 508 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 RN7SL393P-201ENST00000463588 296 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 RN7SL221P-201ENST00000466190 281 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.43□□□□□ -1.38
NFKB1P19838 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 ELOCP31-201ENST00000540463 467 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AC023050.3-201ENST00000541142 333 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.43□□□□□ -1.38
NFKB1P19838 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 ARGFXP2-201ENST00000579304 949 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.43□□□□□ -1.38
NFKB1P19838 AC136443.5-201ENST00000603741 370 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.43□□□□□ -1.38
NFKB1P19838 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.43□□□□□ -1.38
NFKB1P19838 AL122125.1-201ENST00000616999 600 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AL713922.2-201ENST00000619384 716 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 MIR7159-201ENST00000620587 66 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NFKB1P19838 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NFKB1P19838 IMMTP1-201ENST00000435590 2219 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NFKB1P19838 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NFKB1P19838 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.43□□□□□ -1.38
NFKB1P19838 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NFKB1P19838 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
NFKB1P19838 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.43□□□□□ -1.38
NFKB1P19838 AL118496.1-201ENST00000440201 1812 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 ICE2P1-201ENST00000512800 1849 ntBASIC6.43□□□□□ -1.38
NFKB1P19838 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms