Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 AC103591.2-201ENST00000265259 766 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 RN7SKP69-201ENST00000365390 305 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 RPL17P12-201ENST00000413391 526 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 AL139415.2-201ENST00000431968 163 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 PNKDP1-201ENST00000435914 430 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 FMO7P-201ENST00000436045 768 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 GAPDHP48-201ENST00000436626 961 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 RPL12P11-201ENST00000439970 501 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 NF1P3-201ENST00000457709 450 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 RN7SL188P-201ENST00000469842 285 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC098847.1-201ENST00000473094 348 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 RN7SL57P-201ENST00000493687 290 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 RN7SKP298-201ENST00000515950 94 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 RN7SKP283-201ENST00000517197 270 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 RN7SKP35-201ENST00000517210 151 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 LSM3P2-201ENST00000551246 273 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC084757.1-201ENST00000559987 490 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC093519.1-201ENST00000566109 298 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 MIR7853-201ENST00000584820 132 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC124916.2-201ENST00000604416 224 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC108673.3-201ENST00000609183 335 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC116651.1-201ENST00000609724 556 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC090607.5-201ENST00000615692 224 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.63□□□□□ -1.51
COL6A2P12110 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.63□□□□□ -1.51
COL6A2P12110 OR5BR1P-201ENST00000524992 1330 ntBASIC5.63□□□□□ -1.51
COL6A2P12110 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
COL6A2P12110 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL6A2P12110 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL6A2P12110 SMG1P7-201ENST00000565246 2704 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
COL6A2P12110 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL6A2P12110 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COL6A2P12110 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.62□□□□□ -1.51
COL6A2P12110 AL353796.1-201ENST00000561542 3241 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.62□□□□□ -1.51
COL6A2P12110 AC016716.1-201ENST00000265882 708 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL6A2P12110 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.62□□□□□ -1.51
COL6A2P12110 Y_RNA.25-201ENST00000362528 102 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 RNY3P14-201ENST00000384309 102 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 MIR506-201ENST00000384998 124 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 MIR323B-201ENST00000385269 82 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 AL589647.1-201ENST00000402485 466 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 GCNT1P4-201ENST00000404096 329 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 AL357752.1-201ENST00000412817 349 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 AL133482.1-201ENST00000415988 498 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 AC092647.1-201ENST00000420654 287 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 AC005033.1-201ENST00000428904 813 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 AC022022.1-201ENST00000430304 178 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.62□□□□□ -1.51
COL6A2P12110 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.62□□□□□ -1.51
COL6A2P12110 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL6A2P12110 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.62□□□□□ -1.51
COL6A2P12110 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.62□□□□□ -1.51
COL6A2P12110 MTCO3P38-201ENST00000468910 766 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.62□□□□□ -1.51
COL6A2P12110 RPS17P15-201ENST00000475609 349 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 TMED11P-201ENST00000479478 690 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 RPL7P6-201ENST00000480903 738 ntBASIC5.62□□□□□ -1.51
COL6A2P12110 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms