Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.17□□□□□ -1.58
COL5A2P05997 TMF1P1-201ENST00000576058 373 ntBASIC5.17□□□□□ -1.58
COL5A2P05997 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.17□□□□□ -1.58
COL5A2P05997 AC015871.5-202ENST00000623252 701 ntBASIC5.17□□□□□ -1.58
COL5A2P05997 AC055839.1-201ENST00000634467 498 ntBASIC5.17□□□□□ -1.58
COL5A2P05997 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
COL5A2P05997 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL5A2P05997 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL5A2P05997 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL5A2P05997 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.17□□□□□ -1.58
COL5A2P05997 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL5A2P05997 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL5A2P05997 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL5A2P05997 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.16□□□□□ -1.58
COL5A2P05997 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL5A2P05997 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL5A2P05997 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL5A2P05997 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL5A2P05997 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL5A2P05997 MIR490-201ENST00000384865 128 ntBASIC5.16□□□□□ -1.58
COL5A2P05997 PEX12P1-201ENST00000400284 1048 ntBASIC5.16□□□□□ -1.58
COL5A2P05997 OR6C71P-201ENST00000432580 913 ntBASIC5.16□□□□□ -1.58
COL5A2P05997 AL591473.1-201ENST00000464297 313 ntBASIC5.16□□□□□ -1.58
COL5A2P05997 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.16□□□□□ -1.58
COL5A2P05997 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.16□□□□□ -1.58
COL5A2P05997 MIR4433B-201ENST00000581329 102 ntBASIC5.16□□□□□ -1.58
COL5A2P05997 AC005000.2-201ENST00000605468 310 ntBASIC5.16□□□□□ -1.58
COL5A2P05997 AC243756.2-201ENST00000618406 463 ntBASIC5.16□□□□□ -1.58
COL5A2P05997 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.16□□□□□ -1.58
COL5A2P05997 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COL5A2P05997 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL5A2P05997 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL5A2P05997 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL5A2P05997 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.15□□□□□ -1.58
COL5A2P05997 RPS23P10-201ENST00000416185 486 ntBASIC5.15□□□□□ -1.58
COL5A2P05997 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.15□□□□□ -1.58
COL5A2P05997 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.15□□□□□ -1.58
COL5A2P05997 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL5A2P05997 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.15□□□□□ -1.58
COL5A2P05997 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.15□□□□□ -1.58
COL5A2P05997 AC007458.1-201ENST00000542812 373 ntBASIC5.15□□□□□ -1.58
COL5A2P05997 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.15□□□□□ -1.58
COL5A2P05997 RPL21P12-201ENST00000559810 515 ntBASIC5.15□□□□□ -1.58
COL5A2P05997 AC106782.4-201ENST00000568264 210 ntBASIC5.15□□□□□ -1.58
COL5A2P05997 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.15□□□□□ -1.58
COL5A2P05997 AL133445.2-201ENST00000611191 527 ntBASIC5.15□□□□□ -1.58
COL5A2P05997 AC243654.2-201ENST00000612843 443 ntBASIC5.15□□□□□ -1.58
COL5A2P05997 AL109620.1-201ENST00000618738 1197 ntBASIC5.15□□□□□ -1.58
COL5A2P05997 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.15□□□□□ -1.58
COL5A2P05997 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL5A2P05997 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL5A2P05997 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.15□□□□□ -1.58
COL5A2P05997 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL5A2P05997 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL5A2P05997 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
COL5A2P05997 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL5A2P05997 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL5A2P05997 AC083899.2-201ENST00000423285 1376 ntBASIC5.15□□□□□ -1.59
COL5A2P05997 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.15□□□□□ -1.59
COL5A2P05997 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL5A2P05997 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL5A2P05997 RNA5SP267-201ENST00000364893 126 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.14□□□□□ -1.59
COL5A2P05997 RPS7P15-201ENST00000415804 584 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.14□□□□□ -1.59
COL5A2P05997 SKP1P3-201ENST00000429280 487 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 RPS3AP46-201ENST00000448352 682 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 UBDP1-202ENST00000457888 382 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 SNORA48.9-201ENST00000516419 162 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.14□□□□□ -1.59
COL5A2P05997 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.14□□□□□ -1.59
COL5A2P05997 AL031666.3-201ENST00000609320 1006 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.14□□□□□ -1.59
COL5A2P05997 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
COL5A2P05997 AC022960.2-201ENST00000616300 666 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 AC125336.1-201ENST00000508893 2827 ntBASIC5.14□□□□□ -1.59
COL5A2P05997 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.14□□□□□ -1.59
COL5A2P05997 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL5A2P05997 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL5A2P05997 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL5A2P05997 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL5A2P05997 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.13□□□□□ -1.59
COL5A2P05997 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.13□□□□□ -1.59
COL5A2P05997 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.13□□□□□ -1.59
COL5A2P05997 MIR634-201ENST00000385208 97 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 RPL21P23-201ENST00000446654 460 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 RPS4XP10-201ENST00000465034 731 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
COL5A2P05997 SETP14-201ENST00000497538 873 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.13□□□□□ -1.59
COL5A2P05997 DEFB109D-201ENST00000529497 240 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 OR5B10P-201ENST00000532869 642 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 AC124312.6-202ENST00000623624 418 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL5A2P05997 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL5A2P05997 THAP12P5-201ENST00000405864 2275 ntBASIC5.13□□□□□ -1.59
COL5A2P05997 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.13□□□□□ -1.59
COL5A2P05997 AC067945.1-201ENST00000342609 618 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms