Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC091390.3-201ENST00000426478 338 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 AL390879.2-203ENST00000426943 1121 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 CYCSP4-201ENST00000429682 331 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.62□□□□□ -1.67
COL4A1P02462 VN1R25P-201ENST00000443385 738 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 RPL21P23-201ENST00000446654 460 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 PDSS1P2-201ENST00000449397 678 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 VN1R40P-201ENST00000455196 941 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 APOOP2-201ENST00000461561 539 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A1P02462 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A1P02462 RN7SL585P-201ENST00000470538 280 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.62□□□□□ -1.67
COL4A1P02462 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A1P02462 CYP4A43P-201ENST00000568156 121 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
COL4A1P02462 AC012603.1-201ENST00000606424 528 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A1P02462 AL121890.2-201ENST00000617644 465 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 AC010266.2-201ENST00000564741 3255 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 AC006971.1-201ENST00000407916 4486 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 AP000641.1-201ENST00000531988 1639 ntBASIC4.62□□□□□ -1.67
COL4A1P02462 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
COL4A1P02462 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.61□□□□□ -1.67
COL4A1P02462 MIR1251-201ENST00000408552 70 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 RNA5SP306-201ENST00000411087 107 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 AL590609.2-201ENST00000421430 368 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A1P02462 AC104978.1-201ENST00000449387 391 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 OR52Y1P-201ENST00000452418 828 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 PPBPP1-201ENST00000510807 373 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A1P02462 AC020914.6-201ENST00000594327 272 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 AL160281.1-201ENST00000605307 311 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 AC243654.2-201ENST00000612843 443 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.61□□□□□ -1.67
COL4A1P02462 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A1P02462 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A1P02462 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A1P02462 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A1P02462 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
COL4A1P02462 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A1P02462 AC120036.2-201ENST00000509729 1474 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A1P02462 SETP9-201ENST00000423837 832 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 AC005300.1-201ENST00000428401 373 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL4A1P02462 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
COL4A1P02462 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.61□□□□□ -1.67
COL4A1P02462 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.61□□□□□ -1.67
COL4A1P02462 AC090877.1-201ENST00000561418 344 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
COL4A1P02462 AL159169.3-201ENST00000608871 561 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 AL591424.2-201ENST00000617023 128 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 AC243312.2-201ENST00000623340 601 ntBASIC4.61□□□□□ -1.67
COL4A1P02462 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
COL4A1P02462 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A1P02462 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A1P02462 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
COL4A1P02462 AL035425.3-201ENST00000564206 4996 ntBASIC4.6□□□□□ -1.67
COL4A1P02462 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A1P02462 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A1P02462 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A1P02462 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A1P02462 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.6□□□□□ -1.67
COL4A1P02462 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
COL4A1P02462 OR52E6-202ENST00000379946 954 ntBASIC4.6□□□□□ -1.67
COL4A1P02462 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A1P02462 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.6□□□□□ -1.67
COL4A1P02462 AC107016.1-201ENST00000550463 337 ntBASIC4.6□□□□□ -1.67
COL4A1P02462 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.6□□□□□ -1.67
COL4A1P02462 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A1P02462 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A1P02462 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.6□□□□□ -1.67
COL4A1P02462 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A1P02462 MTCO1P12-201ENST00000414273 1543 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 AC032011.1-201ENST00000611703 1549 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
COL4A1P02462 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.59□□□□□ -1.67
COL4A1P02462 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL4A1P02462 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL4A1P02462 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A1P02462 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A1P02462 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A1P02462 RNA5SP146-201ENST00000410743 123 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 AC073387.1-201ENST00000453261 709 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 snoU13.24-201ENST00000458998 104 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 WBP1LP4-201ENST00000505043 344 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 DUX4L52-201ENST00000549363 777 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A1P02462 OR2BH1P-201ENST00000608850 864 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.59□□□□□ -1.67
COL4A1P02462 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A1P02462 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.59□□□□□ -1.67
COL4A1P02462 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
COL4A1P02462 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COL4A1P02462 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
COL4A1P02462 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
COL4A1P02462 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms