Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.75□□□□□ -1.65
COL1A1P02452 AC104306.1-201ENST00000449702 371 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 CYCSP53-201ENST00000455540 265 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 AC022795.1-201ENST00000473808 480 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.75□□□□□ -1.65
COL1A1P02452 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.75□□□□□ -1.65
COL1A1P02452 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.75□□□□□ -1.65
COL1A1P02452 AC084759.1-201ENST00000561168 290 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 AL391497.1-201ENST00000608671 547 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AC124312.6-202ENST00000623624 418 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AL034408.1-202ENST00000636088 415 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
COL1A1P02452 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 AC125336.1-201ENST00000508893 2827 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
COL1A1P02452 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 PTMAP5-201ENST00000393073 333 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 AC114814.2-201ENST00000419195 485 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 AC117434.1-201ENST00000419971 836 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.74□□□□□ -1.65
COL1A1P02452 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.74□□□□□ -1.65
COL1A1P02452 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.74□□□□□ -1.65
COL1A1P02452 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.74□□□□□ -1.65
COL1A1P02452 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.74□□□□□ -1.65
COL1A1P02452 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.74□□□□□ -1.65
COL1A1P02452 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.74□□□□□ -1.65
COL1A1P02452 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 NPM1P47-201ENST00000560843 856 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.74□□□□□ -1.65
COL1A1P02452 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.74□□□□□ -1.65
COL1A1P02452 MIR3124-201ENST00000582636 67 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.74□□□□□ -1.65
COL1A1P02452 AC016590.3-201ENST00000611171 753 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 AC079684.1-201ENST00000621405 437 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 AC018816.2-201ENST00000621460 353 ntBASIC4.74□□□□□ -1.65
COL1A1P02452 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL1A1P02452 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL1A1P02452 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
COL1A1P02452 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.73□□□□□ -1.65
COL1A1P02452 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL1A1P02452 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
COL1A1P02452 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.73□□□□□ -1.65
COL1A1P02452 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL1A1P02452 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
COL1A1P02452 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL1A1P02452 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
COL1A1P02452 MIR199A2-201ENST00000385289 110 ntBASIC4.73□□□□□ -1.65
COL1A1P02452 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.73□□□□□ -1.65
COL1A1P02452 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.73□□□□□ -1.65
COL1A1P02452 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.73□□□□□ -1.65
COL1A1P02452 HMGN2P31-201ENST00000432430 273 ntBASIC4.73□□□□□ -1.65
COL1A1P02452 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.73□□□□□ -1.65
COL1A1P02452 UBE2CP3-201ENST00000502715 450 ntBASIC4.73□□□□□ -1.65
COL1A1P02452 CYP4A43P-201ENST00000568156 121 ntBASIC4.73□□□□□ -1.65
COL1A1P02452 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.73□□□□□ -1.65
COL1A1P02452 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.73□□□□□ -1.65
COL1A1P02452 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.73□□□□□ -1.65
COL1A1P02452 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COL1A1P02452 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.72□□□□□ -1.65
COL1A1P02452 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
COL1A1P02452 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
COL1A1P02452 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.72□□□□□ -1.65
COL1A1P02452 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.72□□□□□ -1.65
COL1A1P02452 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL1A1P02452 RNA5SP72-201ENST00000364442 117 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.72□□□□□ -1.65
COL1A1P02452 MIR183-201ENST00000384958 110 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.72□□□□□ -1.65
COL1A1P02452 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.72□□□□□ -1.65
COL1A1P02452 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL1A1P02452 SYF2P2-201ENST00000417620 583 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 AP000907.1-201ENST00000428428 510 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 NPM1P25-201ENST00000429734 854 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 HIGD1AP4-201ENST00000430194 280 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 RANP8-201ENST00000444720 713 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.72□□□□□ -1.65
COL1A1P02452 RPL31P61-201ENST00000496160 376 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.72□□□□□ -1.65
COL1A1P02452 AC093014.1-201ENST00000548926 724 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.72□□□□□ -1.65
COL1A1P02452 VN1R92P-201ENST00000598511 928 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 AC244505.7-201ENST00000599675 272 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.72□□□□□ -1.65
COL1A1P02452 U3.45-201ENST00000607547 219 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 AL357559.1-201ENST00000622228 274 ntBASIC4.72□□□□□ -1.65
COL1A1P02452 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL1A1P02452 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL1A1P02452 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms