Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 IGKV1-32-201ENST00000519290 311 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC109635.6-201ENST00000525487 1113 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.15□□□□□ -1.75
SHOX2O60902 BGLT3-201ENST00000564523 994 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 CYP2C60P-201ENST00000566088 139 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 MIR4298-201ENST00000584380 73 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.15□□□□□ -1.75
SHOX2O60902 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHOX2O60902 AC098935.2-201ENST00000604222 466 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AL390816.3-201ENST00000604527 1066 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AL354984.3-201ENST00000604803 325 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 AC083809.1-201ENST00000615051 472 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SHOX2O60902 SPATA2P1-201ENST00000431223 2055 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHOX2O60902 ASNSP1-201ENST00000518311 1939 ntBASIC4.15□□□□□ -1.75
SHOX2O60902 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.15□□□□□ -1.75
SHOX2O60902 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHOX2O60902 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 AC132825.1-201ENST00000463573 2247 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 AC090971.4-201ENST00000560291 1800 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHOX2O60902 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHOX2O60902 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SHOX2O60902 RNU1-32P-201ENST00000363937 159 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
SHOX2O60902 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.14□□□□□ -1.75
SHOX2O60902 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AL132765.1-201ENST00000434165 553 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 CEACAMP1-201ENST00000434624 1035 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 AC243772.1-201ENST00000451620 410 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.14□□□□□ -1.75
SHOX2O60902 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.14□□□□□ -1.75
SHOX2O60902 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.14□□□□□ -1.75
SHOX2O60902 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AC135001.1-201ENST00000544546 283 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AC092747.2-201ENST00000545069 983 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 PARP1P2-201ENST00000556806 195 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 AL512782.1-201ENST00000603093 364 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 RMST_8.1-201ENST00000610287 165 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHOX2O60902 AC008121.2-201ENST00000614647 523 ntBASIC4.14□□□□□ -1.75
SHOX2O60902 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.14□□□□□ -1.75
SHOX2O60902 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHOX2O60902 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SHOX2O60902 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SHOX2O60902 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHOX2O60902 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.14□□□□□ -1.75
SHOX2O60902 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHOX2O60902 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHOX2O60902 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SHOX2O60902 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.13□□□□□ -1.75
SHOX2O60902 RNA5SP175-201ENST00000364275 119 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.13□□□□□ -1.75
SHOX2O60902 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SHOX2O60902 RN7SKP100-201ENST00000411258 284 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 SNRPFP1-201ENST00000414761 252 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 NFYAP1-201ENST00000431953 972 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.13□□□□□ -1.75
SHOX2O60902 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.13□□□□□ -1.75
SHOX2O60902 AL138878.2-201ENST00000440581 1241 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SHOX2O60902 RPS29P31-201ENST00000446147 164 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.13□□□□□ -1.75
SHOX2O60902 AC004801.2-202ENST00000463559 283 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 AC053481.1-201ENST00000467217 306 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 AL161747.1-201ENST00000480068 358 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.13□□□□□ -1.75
SHOX2O60902 RPL7P24-201ENST00000493052 752 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.13□□□□□ -1.75
SHOX2O60902 HPRT1P1-201ENST00000509498 657 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.13□□□□□ -1.75
SHOX2O60902 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.13□□□□□ -1.75
SHOX2O60902 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.13□□□□□ -1.75
SHOX2O60902 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHOX2O60902 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.13□□□□□ -1.75
SHOX2O60902 AC022968.1-201ENST00000567372 442 ntBASIC4.13□□□□□ -1.75
SHOX2O60902 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.13□□□□□ -1.75
SHOX2O60902 FAM25E-202ENST00000608562 189 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms