Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.15□□□□□ -1.91
SSSCA1O60232 AL133247.2-201ENST00000603236 482 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AL390816.3-201ENST00000604527 1066 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 AC007390.2-201ENST00000606229 3803 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.15□□□□□ -1.91
SSSCA1O60232 MIR7151-201ENST00000617477 60 ntBASIC3.15□□□□□ -1.91
SSSCA1O60232 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.15□□□□□ -1.91
SSSCA1O60232 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSSCA1O60232 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
SSSCA1O60232 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSSCA1O60232 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSSCA1O60232 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSSCA1O60232 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.14□□□□□ -1.91
SSSCA1O60232 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.14□□□□□ -1.91
SSSCA1O60232 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSSCA1O60232 SPTLC1P2-201ENST00000407089 121 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSSCA1O60232 RPL23AP1-201ENST00000428990 471 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 VN1R54P-201ENST00000435210 1049 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.14□□□□□ -1.91
SSSCA1O60232 RPS29P31-201ENST00000446147 164 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 AC073264.2-201ENST00000448886 166 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.14□□□□□ -1.91
SSSCA1O60232 AC009963.2-201ENST00000453431 138 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 RPL23AP24-201ENST00000458203 385 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 AC104849.1-201ENST00000462623 405 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 RN7SL860P-201ENST00000473738 223 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 NIPA2P2-201ENST00000496376 1083 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.14□□□□□ -1.91
SSSCA1O60232 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.14□□□□□ -1.91
SSSCA1O60232 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.14□□□□□ -1.91
SSSCA1O60232 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSSCA1O60232 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.14□□□□□ -1.91
SSSCA1O60232 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.14□□□□□ -1.91
SSSCA1O60232 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.14□□□□□ -1.91
SSSCA1O60232 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSSCA1O60232 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.14□□□□□ -1.91
SSSCA1O60232 AC069366.1-201ENST00000583159 838 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 FAM25E-202ENST00000608562 189 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 RNVU1-4-201ENST00000612985 164 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSSCA1O60232 U7.8-201ENST00000619968 63 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.14□□□□□ -1.91
SSSCA1O60232 AL049555.1-201ENST00000562834 1933 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSSCA1O60232 AC095050.2-201ENST00000510748 1458 ntBASIC3.14□□□□□ -1.91
SSSCA1O60232 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SSSCA1O60232 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.14□□□□□ -1.91
SSSCA1O60232 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SSSCA1O60232 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AL137100.1-201ENST00000556703 1620 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 SNORA51.1-201ENST00000363243 140 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 RNU1-132P-201ENST00000364300 164 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 SNORA62.2-201ENST00000364672 152 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSSCA1O60232 AL391417.1-201ENST00000404100 426 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 MIR1178-201ENST00000408396 91 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 MIR1183-201ENST00000408856 89 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC002075.2-201ENST00000425207 252 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 MOB1AP1-201ENST00000430903 535 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AL353597.2-202ENST00000434901 373 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 IFNWP4-201ENST00000453148 294 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AL645939.1-201ENST00000453429 797 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AC099560.2-201ENST00000457554 255 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 RNU7-157P-201ENST00000459600 66 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 RPL21P71-201ENST00000465598 459 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 OR4A12P-201ENST00000530847 918 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 MIR6868-201ENST00000611215 58 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AL161616.1-201ENST00000611867 286 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.13□□□□□ -1.91
SSSCA1O60232 OR5AC4P-202ENST00000642086 985 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 AP002001.2-201ENST00000529025 1469 ntBASIC3.13□□□□□ -1.91
SSSCA1O60232 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
SSSCA1O60232 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms