Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC010099.3-201ENST00000423896 409 ntBASIC4.95□□□□□ -1.62
MSI1O43347 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.95□□□□□ -1.62
MSI1O43347 AC092170.1-201ENST00000440211 356 ntBASIC4.95□□□□□ -1.62
MSI1O43347 ARL5AP2-201ENST00000444698 533 ntBASIC4.95□□□□□ -1.62
MSI1O43347 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.95□□□□□ -1.62
MSI1O43347 AC079168.2-201ENST00000453977 416 ntBASIC4.95□□□□□ -1.62
MSI1O43347 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 AC005410.1-202ENST00000460347 485 ntBASIC4.95□□□□□ -1.62
MSI1O43347 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 GYG1P1-201ENST00000460864 698 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AL591473.1-201ENST00000464297 313 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AC107015.1-201ENST00000466902 747 ntBASIC4.95□□□□□ -1.62
MSI1O43347 RN7SL354P-201ENST00000469282 294 ntBASIC4.95□□□□□ -1.62
MSI1O43347 NDUFA5P9-201ENST00000472609 340 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AC004263.1-201ENST00000479327 332 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AC090686.1-201ENST00000481577 749 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AC011037.1-201ENST00000483964 558 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AP000563.1-201ENST00000490865 758 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.95□□□□□ -1.62
MSI1O43347 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.95□□□□□ -1.62
MSI1O43347 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.95□□□□□ -1.62
MSI1O43347 DEFB130C-202ENST00000530001 230 ntBASIC4.95□□□□□ -1.62
MSI1O43347 MTCO2P15-201ENST00000532655 656 ntBASIC4.95□□□□□ -1.62
MSI1O43347 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
MSI1O43347 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.95□□□□□ -1.62
MSI1O43347 AC008083.2-201ENST00000546707 476 ntBASIC4.95□□□□□ -1.62
MSI1O43347 BNIP3P1-201ENST00000547295 580 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 AC087477.6-201ENST00000559595 843 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.95□□□□□ -1.62
MSI1O43347 BNIP3P24-201ENST00000593398 557 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.95□□□□□ -1.62
MSI1O43347 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.95□□□□□ -1.62
MSI1O43347 AC009237.15-201ENST00000610252 501 ntBASIC4.95□□□□□ -1.62
MSI1O43347 MIR6820-201ENST00000611508 62 ntBASIC4.95□□□□□ -1.62
MSI1O43347 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.95□□□□□ -1.62
MSI1O43347 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MSI1O43347 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
MSI1O43347 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.95□□□□□ -1.62
MSI1O43347 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.95□□□□□ -1.62
MSI1O43347 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.95□□□□□ -1.62
MSI1O43347 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 AC126323.6-202ENST00000568092 3511 ntBASIC4.94□□□□□ -1.62
MSI1O43347 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MSI1O43347 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 AC073055.1-201ENST00000456901 1621 ntBASIC4.94□□□□□ -1.62
MSI1O43347 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MSI1O43347 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MSI1O43347 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.94□□□□□ -1.62
MSI1O43347 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MSI1O43347 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.94□□□□□ -1.62
MSI1O43347 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 AC017079.1-201ENST00000333650 415 ntBASIC4.94□□□□□ -1.62
MSI1O43347 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSI1O43347 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.94□□□□□ -1.62
MSI1O43347 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.94□□□□□ -1.62
MSI1O43347 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 RNY3P9-201ENST00000384727 106 ntBASIC4.94□□□□□ -1.62
MSI1O43347 ATP5F1P2-201ENST00000398143 760 ntBASIC4.94□□□□□ -1.62
MSI1O43347 AC119751.3-201ENST00000399720 670 ntBASIC4.94□□□□□ -1.62
MSI1O43347 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.94□□□□□ -1.62
MSI1O43347 AP000357.1-201ENST00000409926 1165 ntBASIC4.94□□□□□ -1.62
MSI1O43347 RN7SKP222-201ENST00000410651 315 ntBASIC4.94□□□□□ -1.62
MSI1O43347 RNA5SP498-201ENST00000411342 120 ntBASIC4.94□□□□□ -1.62
MSI1O43347 RPL26P29-201ENST00000415623 438 ntBASIC4.94□□□□□ -1.62
MSI1O43347 AL356320.2-201ENST00000417263 507 ntBASIC4.94□□□□□ -1.62
MSI1O43347 E2F6P2-201ENST00000420708 748 ntBASIC4.94□□□□□ -1.62
MSI1O43347 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.94□□□□□ -1.62
MSI1O43347 OR6K4P-201ENST00000423179 955 ntBASIC4.94□□□□□ -1.62
MSI1O43347 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 EEF1A1P39-201ENST00000440791 250 ntBASIC4.94□□□□□ -1.62
MSI1O43347 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 MTCYBP42-201ENST00000444653 1130 ntBASIC4.94□□□□□ -1.62
MSI1O43347 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.94□□□□□ -1.62
MSI1O43347 AC073264.2-201ENST00000448886 166 ntBASIC4.94□□□□□ -1.62
MSI1O43347 CDC42P1-201ENST00000456658 548 ntBASIC4.94□□□□□ -1.62
MSI1O43347 AC091544.1-201ENST00000484702 348 ntBASIC4.94□□□□□ -1.62
MSI1O43347 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 AC091860.1-201ENST00000505723 432 ntBASIC4.94□□□□□ -1.62
MSI1O43347 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 PRELID3BP4-201ENST00000515476 571 ntBASIC4.94□□□□□ -1.62
MSI1O43347 RNU1-6P-201ENST00000516290 144 ntBASIC4.94□□□□□ -1.62
MSI1O43347 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.94□□□□□ -1.62
MSI1O43347 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.94□□□□□ -1.62
MSI1O43347 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms