Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 MTND4LP24-201ENST00000572277 291 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC005034.4-201ENST00000603612 899 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL160290.3-201ENST00000604869 165 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC024940.4-201ENST00000605507 246 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL031666.3-201ENST00000609320 1006 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC015813.4-201ENST00000610469 179 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AC078899.5-201ENST00000612475 178 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL138721.1-201ENST00000616756 179 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AL645927.2-201ENST00000618350 349 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AP001784.1-201ENST00000624107 428 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 OR5AC4P-202ENST00000642086 985 ntBASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.86□□□□□ -1.79
RHBDD3Q9Y3P4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 IGKV7-3-201ENST00000357453 298 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AC004022.2-201ENST00000413824 193 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AP001324.1-201ENST00000428553 399 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 FTH1P6-201ENST00000430768 320 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AL359265.2-201ENST00000434367 631 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 RPL23AP43-201ENST00000446445 471 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 DDX39BP2-208ENST00000453923 258 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 FABP5P6-201ENST00000510588 409 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 IGHV3-32-201ENST00000519182 355 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 RN7SL690P-201ENST00000582087 240 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AC007546.2-201ENST00000623996 360 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 AC119674.1-220ENST00000641502 1048 ntBASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
RHBDD3Q9Y3P4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 SNORD113.2-201ENST00000364166 89 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 GCNT6-201ENST00000379591 934 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 MIR93-201ENST00000385024 80 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC023347.2-201ENST00000433994 462 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 EIF2S2P2-201ENST00000447161 982 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 RPS27AP17-201ENST00000463344 455 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 RN7SL354P-201ENST00000469282 294 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 RPL21P103-201ENST00000479921 488 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 SNX5P1-201ENST00000505757 1041 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC115085.1-201ENST00000588924 229 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AP003117.2-201ENST00000606010 545 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC020634.1-201ENST00000608701 549 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC105429.2-201ENST00000610567 517 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AL161616.1-201ENST00000611867 286 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AL133243.1-201ENST00000614487 366 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AC100827.5-201ENST00000615883 426 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AL713922.2-201ENST00000619384 716 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 C2orf27A-204ENST00000623058 969 ntBASIC3.84□□□□□ -1.79
RHBDD3Q9Y3P4 AL356121.2-201ENST00000624715 780 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms