Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC026826.1-201ENST00000493002 361 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AL035404.1-201ENST00000497982 568 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC024451.1-201ENST00000508013 779 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 Y_RNA.665-201ENST00000516177 98 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 IGHV4-55-201ENST00000520889 368 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC121334.2-201ENST00000605387 271 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC133104.2-201ENST00000615272 193 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AL162373.1-201ENST00000620433 407 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AC034229.6-201ENST00000623704 224 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 AL049780.3-201ENST00000624612 1583 ntBASIC8.86□□□□□ -0.99
PHF8Q9UPP1 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
PHF8Q9UPP1 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC011493.1-201ENST00000596753 1632 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AL157777.2-201ENST00000258070 137 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 MIR199B-201ENST00000384849 110 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 RPL31P52-201ENST00000407532 367 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 MIR548F5-201ENST00000408421 86 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 RPL37P10-201ENST00000412884 288 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 HMGB3P10-201ENST00000434734 572 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 RPS3AP38-201ENST00000435889 763 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC023141.3-201ENST00000436698 278 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AL133351.3-201ENST00000454998 193 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC098847.1-201ENST00000473094 348 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC022415.1-202ENST00000486612 523 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 RNU6-864P-201ENST00000516256 108 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 Y_RNA.682-201ENST00000516457 100 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC087360.1-201ENST00000518788 616 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC090572.1-201ENST00000519251 160 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 RANP9-201ENST00000519957 271 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 RPL7P20-201ENST00000520308 745 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AP000889.1-201ENST00000530968 660 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC008555.7-201ENST00000605008 583 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC007546.1-201ENST00000619452 559 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AC137590.2-201ENST00000619709 240 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 AF287957.1-201ENST00000607368 1595 ntBASIC8.85□□□□□ -0.99
PHF8Q9UPP1 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PHF8Q9UPP1 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 RNU6-532P-201ENST00000384318 107 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 Y_RNA.552-201ENST00000384665 112 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 MIR548M-201ENST00000408260 86 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 RN7SKP158-201ENST00000410453 326 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC8.84□□□□□ -0.99
PHF8Q9UPP1 TXNP5-201ENST00000441043 315 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 AC104058.1-201ENST00000448028 297 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 SLC25A18P1-201ENST00000449385 454 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 RN7SL177P-201ENST00000476596 299 ntBASIC8.84□□□□□ -0.99
PHF8Q9UPP1 RPL39P5-202ENST00000512505 151 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms