Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC103858.2-201ENST00000621471 543 ntBASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
VPS29Q9UBQ0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 MAPK10-253ENST00000641010 4072 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 RNU1-32P-201ENST00000363937 159 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AL603766.1-201ENST00000407763 664 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AC108032.1-201ENST00000416706 207 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 YWHAEP5-201ENST00000431545 765 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AC096638.2-201ENST00000434965 711 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 RPS4XP4-201ENST00000443195 763 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AL451050.1-201ENST00000450126 415 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 FABP3P2-201ENST00000453169 399 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 IGBP1P5-201ENST00000507524 1000 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AC026368.1-201ENST00000614934 690 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 AL356274.1-201ENST00000617064 410 ntBASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS29Q9UBQ0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 OR11H4-201ENST00000315409 1082 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 RNA5SP39-201ENST00000411245 120 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 HSPE1P12-201ENST00000412576 301 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 RAB9AP4-201ENST00000415230 609 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 CHIAP3-201ENST00000423668 1133 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 CLIC4P1-201ENST00000453177 535 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 AP003730.1-201ENST00000524605 285 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 MIR4284-201ENST00000578924 81 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 MIR3138-201ENST00000585238 82 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 MRPS35P3-201ENST00000603189 709 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 AP003392.5-201ENST00000607857 415 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 AC010608.2-201ENST00000624830 470 ntBASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS29Q9UBQ0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 CCT8P1-201ENST00000413611 1657 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 USP9YP4-201ENST00000424401 1745 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC010329.2-201ENST00000595195 2737 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 RNU11-4P-201ENST00000391149 133 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 OR6C69P-201ENST00000394268 893 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 HMGB3P19-201ENST00000403971 560 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 RN7SKP33-201ENST00000410942 340 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 RPL18P10-201ENST00000425606 538 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 SEC63P1-201ENST00000425785 1258 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 COX6CP15-201ENST00000426313 211 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC087650.1-201ENST00000431445 468 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AL354710.1-201ENST00000453641 246 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 SYT14P1-201ENST00000481459 721 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC034205.1-201ENST00000520621 638 ntBASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS29Q9UBQ0 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms