Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 MROH3P-201ENST00000435735 2676 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-769P-201ENST00000384407 104 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC092642.1-201ENST00000392417 425 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 RPL23AP32-201ENST00000395315 459 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL354890.1-201ENST00000413730 346 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 HSPE1P1-201ENST00000421494 318 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC007365.2-201ENST00000428806 458 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL445991.1-201ENST00000450381 475 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 MEMO1P3-201ENST00000459811 302 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 RN7SL372P-201ENST00000461982 298 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC017015.1-201ENST00000477387 286 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 RN7SL143P-201ENST00000496780 297 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC011411.1-201ENST00000509592 876 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC107222.1-201ENST00000510899 637 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 SUMO2P7-201ENST00000511179 285 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 FTH1P9-201ENST00000513251 355 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 EEF1B2P2-201ENST00000519625 676 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC027544.3-201ENST00000535082 757 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC007537.1-201ENST00000539347 327 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AL135978.1-201ENST00000553618 1266 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 NMNAT1P1-201ENST00000554095 876 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 HMGB1P6-201ENST00000569046 646 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC104785.1-201ENST00000603220 588 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC020765.1-201ENST00000604296 328 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 BCRP9-201ENST00000605312 388 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC005014.2-201ENST00000607795 599 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC095038.1-201ENST00000429248 1591 ntBASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CUEDC1Q9NWM3 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RPL12P13-201ENST00000310055 497 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 Y_RNA.100-201ENST00000363141 102 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RN7SKP47-201ENST00000365347 328 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-1062P-201ENST00000383908 107 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 Y_RNA.556-201ENST00000384677 113 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MIR187-201ENST00000385062 109 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 MIR92A2-201ENST00000385299 75 ntBASIC6.68□□□□□ -1.34
CUEDC1Q9NWM3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms