Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC008033.1-201ENST00000216407 1162 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 OR5P1P-201ENST00000299512 925 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 RPL23AP26-201ENST00000412728 464 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC009237.10-201ENST00000414112 510 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 SNRPFP1-201ENST00000414761 252 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 CR848007.2-201ENST00000424918 787 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC073587.1-201ENST00000447093 876 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 DHFRP3-201ENST00000455595 559 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC005008.1-201ENST00000456151 612 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 RPL7P19-201ENST00000469948 618 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC025181.1-201ENST00000477507 416 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 OR52A4P-202ENST00000481634 799 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC105137.1-201ENST00000484355 562 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC041039.1-201ENST00000485656 536 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 SNORA31.9-201ENST00000516429 84 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 RPL21P7-201ENST00000557463 483 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 MIR4716-201ENST00000579628 84 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 IPO5P1-202ENST00000600039 287 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AL118556.2-201ENST00000614375 824 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC104307.1-201ENST00000616142 196 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC010300.1-201ENST00000600671 5134 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 MAPK10-303ENST00000641324 3959 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 RNU1-83P-201ENST00000363426 164 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 RNA5SP366-201ENST00000365454 123 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 RNU6-883P-201ENST00000384597 107 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AL139095.3-201ENST00000419672 1203 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 TRAV8-5-201ENST00000537369 341 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 MIR1254-2-201ENST00000579553 63 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC023043.4-201ENST00000612081 449 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC003001.2-201ENST00000616294 831 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 ZYXP1-201ENST00000617638 118 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AC234782.5-201ENST00000617723 324 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AP006248.2-201ENST00000623309 592 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 MIR3653-201ENST00000625572 110 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 AL139811.1-201ENST00000424779 2299 ntBASIC4.62□□□□□ -1.67
HPS4Q9NQG7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS4Q9NQG7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 RNU1-132P-201ENST00000364300 164 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 RNU6-304P-201ENST00000364855 107 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 SNORA37-201ENST00000384504 129 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 SNORD96B-201ENST00000386148 79 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 CCNB2P1-201ENST00000399411 1150 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 RNA5SP146-201ENST00000410743 123 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 CEACAMP8-201ENST00000413902 580 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 TRGV6-201ENST00000417928 299 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 CYCSP10-201ENST00000417973 294 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 KCTD10P1-201ENST00000434203 625 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms