Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 Z99496.1-201ENST00000469424 1477 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 IRF5P1-201ENST00000504852 2164 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC119744.1-201ENST00000454746 1715 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 RN7SKP185-201ENST00000362813 326 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 RNVU1-6-201ENST00000364688 164 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 SNORA66-201ENST00000384792 133 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 MIR589-201ENST00000385238 99 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 SNORD65.1-201ENST00000390889 71 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 GSTA8P-201ENST00000404253 637 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 RPL26P29-201ENST00000415623 438 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC048351.1-201ENST00000420064 602 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC005345.1-201ENST00000431868 217 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC008072.1-201ENST00000434254 824 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AL354941.1-201ENST00000438600 464 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC092393.1-201ENST00000439625 742 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 MTND3P1-201ENST00000441336 220 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 NOP56P2-201ENST00000447491 769 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 RPS27AP15-201ENST00000447672 466 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 RPL37P3-201ENST00000456825 293 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 RPL7P18-201ENST00000478965 734 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 RPS3AP43-201ENST00000479743 781 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 BTF3P13-201ENST00000513224 490 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AL671862.1-201ENST00000515851 349 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 RNA5SP135-201ENST00000517019 125 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC018442.3-201ENST00000523025 183 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 NMNAT1P1-201ENST00000554095 876 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 MIR4330-201ENST00000579077 105 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC110760.3-201ENST00000598794 467 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC106791.2-201ENST00000604680 391 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC012557.2-201ENST00000605919 418 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC122108.2-201ENST00000611946 526 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC011939.3-201ENST00000613686 466 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 AC004076.2-201ENST00000620532 3323 ntBASIC5.8□□□□□ -1.48
VTA1Q9NP79 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VTA1Q9NP79 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VTA1Q9NP79 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VTA1Q9NP79 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 RN7SKP182-201ENST00000410772 298 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 NRBF2P2-201ENST00000413087 861 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.79□□□□□ -1.48
VTA1Q9NP79 AL807761.1-201ENST00000417622 171 ntBASIC5.79□□□□□ -1.48
VTA1Q9NP79 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms