Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL672167.1-203ENST00000641299 2975 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AL391684.1-202ENST00000641293 1636 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 USP9YP4-201ENST00000424401 1745 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AC134882.1-201ENST00000603738 1676 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 EOGT-210ENST00000615922 1931 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AL121657.1-201ENST00000327215 531 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 RN7SKP44-201ENST00000363602 316 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AL080315.1-201ENST00000406055 466 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 VDAC1P9-201ENST00000412766 841 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 PDSS1P1-201ENST00000422953 1114 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 RNF19BPX-201ENST00000426224 625 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 RPS24P8-201ENST00000431490 402 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 KCTD10P1-201ENST00000434203 625 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 RPS3AP54-201ENST00000435535 734 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 ISCUP1-201ENST00000454451 448 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AC021087.2-201ENST00000504656 1203 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 SNORA70.17-201ENST00000516449 133 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AL161713.1-201ENST00000555538 145 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 SNX18P1Y-201ENST00000616231 511 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 ZYXP1-201ENST00000617638 118 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AL391597.1-201ENST00000618707 694 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 AC100871.1-201ENST00000507871 1456 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 MFSD8-242ENST00000641690 4199 ntBASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TM9SF3Q9HD45 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 RNA5SP388-201ENST00000362584 119 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 RNU1-20P-201ENST00000363314 162 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 RNU6-819P-201ENST00000364116 107 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 RNU6-244P-201ENST00000391028 104 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 MIR921-201ENST00000401133 56 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 RPL23AP26-201ENST00000412728 464 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 Z85994.2-201ENST00000434327 452 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC239367.2-201ENST00000447309 705 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AL935212.3-201ENST00000450729 284 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 TPMTP4-201ENST00000450749 678 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 RPL7P48-201ENST00000461513 746 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 RPL7P19-201ENST00000469948 618 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 UQCRHP4-201ENST00000471686 272 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 CYCSP28-201ENST00000534284 321 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 VN1R85P-201ENST00000601587 426 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC005520.3-201ENST00000602874 370 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC115621.1-201ENST00000604653 858 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC090525.3-201ENST00000605601 189 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC024941.1-201ENST00000612250 334 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AL158196.1-201ENST00000616786 434 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AP003072.4-201ENST00000624580 310 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AC006971.1-201ENST00000407916 4486 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 KPNA2P2-201ENST00000419546 1489 ntBASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.48□□□□□ -1.69
TM9SF3Q9HD45 AL133412.1-201ENST00000380194 2992 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms