Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL772161.1-201ENST00000439130 476 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 ARF4P4-201ENST00000439608 520 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC108463.1-201ENST00000450258 347 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL935212.3-201ENST00000450729 284 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC011005.3-201ENST00000491624 395 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 RPL36AP41-201ENST00000493820 306 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC108120.2-201ENST00000512973 294 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC090151.1-201ENST00000520784 730 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL110118.1-201ENST00000553543 400 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL049870.4-201ENST00000555741 486 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 MIR4789-201ENST00000577469 82 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 RN7SL652P-201ENST00000577769 300 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 MIR4443-201ENST00000585052 53 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 RN7SL622P-201ENST00000585292 275 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC087683.2-201ENST00000611384 326 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL353726.1-201ENST00000614041 1000 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC022079.2-201ENST00000619739 566 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC015908.5-201ENST00000623289 343 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL109659.3-201ENST00000624985 950 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 OR6C71P-202ENST00000641886 1107 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC083843.3-201ENST00000623679 2186 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 RNA5SP151-201ENST00000365632 117 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 HMGB1P13-201ENST00000406019 642 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 RN7SKP267-201ENST00000410381 285 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC073136.2-201ENST00000417282 849 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 PDSS1P1-201ENST00000422953 1114 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 HMGB3P5-201ENST00000428894 612 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 USP9YP9-201ENST00000429406 715 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 MTCYBP15-201ENST00000433123 1127 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AL049745.1-201ENST00000433953 286 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AP000936.3-201ENST00000438127 255 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 MTCO1P53-201ENST00000441633 699 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 PSMC1P13-201ENST00000458195 985 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC021205.1-201ENST00000468797 348 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 RPS4XP6-201ENST00000477670 797 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 RPS3AP6-201ENST00000484430 795 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 OR8G5-201ENST00000524943 1041 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AP001160.4-201ENST00000596971 382 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 BNIP3P32-201ENST00000600015 554 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC073387.2-201ENST00000604797 784 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 AC093535.2-201ENST00000624769 2326 ntBASIC4.74□□□□□ -1.65
PCDH9Q9HC56 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH9Q9HC56 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms