Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 KRT19P6-201ENST00000510983 209 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 AC025884.1-201ENST00000556034 378 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 TVP23BP1-201ENST00000557500 617 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 AC022655.2-201ENST00000577280 318 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 AL139395.1-201ENST00000603662 160 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 AC024220.1-201ENST00000603675 484 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 QTRT1P1-201ENST00000604344 1078 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 BNIP3P19-201ENST00000605397 577 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 FAM27D1-201ENST00000612308 341 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 MIR7702-201ENST00000621931 59 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 RNA5SP196-201ENST00000625967 102 ntBASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
UPF3BQ9BZI7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 VPS35P1-201ENST00000563400 1518 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 RNA5SP104-201ENST00000410989 118 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AC013470.3-201ENST00000420252 1194 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 TRGV7-201ENST00000427089 353 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 snoU13.24-201ENST00000458998 104 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AC107015.1-201ENST00000466902 747 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 HSPD1P11-201ENST00000508643 1702 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 DUX4L52-201ENST00000549363 777 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 PSMB7P1-201ENST00000556349 514 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AGGF1P6-201ENST00000569213 976 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AC022916.3-201ENST00000592961 742 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 AC092162.3-201ENST00000624511 1624 ntBASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
UPF3BQ9BZI7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 RNU6-761P-201ENST00000384148 107 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 LAP3P1-201ENST00000403648 294 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 PGBD4P8-201ENST00000412993 562 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 RPL23AP83-201ENST00000434984 473 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 NPM1P48-201ENST00000436002 853 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 RN7SL132P-201ENST00000478131 296 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC105137.1-201ENST00000484355 562 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC025445.1-201ENST00000502728 300 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 HMGB3P13-201ENST00000511263 607 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC105233.3-201ENST00000531125 744 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AC099676.1-201ENST00000608886 657 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 AP000843.1-201ENST00000624880 701 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
UPF3BQ9BZI7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AL161909.1-201ENST00000397390 712 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AL353748.1-201ENST00000440753 474 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 NPM1P39-201ENST00000449818 867 ntBASIC4.91□□□□□ -1.62
UPF3BQ9BZI7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms