Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 ASNSP1-201ENST00000518311 1939 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 RNU1-49P-201ENST00000363468 159 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 RNU6-853P-201ENST00000364306 107 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 ENSAP1-201ENST00000392855 326 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL049697.2-201ENST00000403708 294 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 OR2W4P-201ENST00000406496 926 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 U3.43-201ENST00000410734 213 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL138785.1-201ENST00000425821 331 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC104651.1-201ENST00000427559 735 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 PSMA6P3-201ENST00000428242 164 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 OR51AB1P-201ENST00000429046 620 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 PPIAP10-201ENST00000438675 458 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 BTF3P5-201ENST00000457252 467 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 ACTR3P3-201ENST00000480448 893 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC013356.1-201ENST00000489027 564 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC025458.1-201ENST00000506046 166 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC010460.1-201ENST00000507087 466 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 OR4A43P-201ENST00000532938 908 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC087883.1-201ENST00000551882 391 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC068768.2-201ENST00000602352 343 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL390208.1-201ENST00000605885 644 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC113194.1-201ENST00000606037 500 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL096712.1-201ENST00000614561 159 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AL355974.3-201ENST00000617383 467 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC072046.2-201ENST00000618366 268 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC105235.1-201ENST00000623208 1816 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC022325.1-201ENST00000502748 2199 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 AC010401.2-201ENST00000575137 4934 ntBASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TRAIPQ9BWF2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 Y_RNA.582-201ENST00000391023 95 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL356421.1-201ENST00000403255 413 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC007568.1-201ENST00000422912 471 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL590233.1-201ENST00000430017 456 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC023141.3-201ENST00000436698 278 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 RPL7P52-201ENST00000449200 742 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC002553.3-201ENST00000453002 341 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 SBDSP1-204ENST00000453858 737 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 SNX18P26-201ENST00000458433 740 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC023424.2-201ENST00000493479 777 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL358832.1-201ENST00000497800 389 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 IGHV1-14-201ENST00000523391 241 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 OR5G4P-201ENST00000525251 760 ntBASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.81□□□□□ -1.32
TRAIPQ9BWF2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms