Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MRPL42P4-201ENST00000453267 443 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC099560.2-201ENST00000457554 255 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 TRBV8-2-201ENST00000475637 270 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC073522.1-201ENST00000483312 377 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 NIFKP7-201ENST00000503365 834 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 MRPS33P3-201ENST00000513456 322 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 RN7SKP46-201ENST00000515942 234 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 RNU6-1129P-201ENST00000515964 104 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC124293.1-201ENST00000530034 493 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AL442163.2-201ENST00000553912 710 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC022662.1-201ENST00000580252 331 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AP000769.2-201ENST00000602344 396 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC095055.1-201ENST00000603472 1113 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC233280.2-201ENST00000603917 1070 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC021749.1-201ENST00000604322 607 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC080013.3-201ENST00000606839 578 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AP005137.2-201ENST00000609238 400 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC105227.2-201ENST00000615075 605 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC018445.2-201ENST00000622987 260 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AP003497.2-201ENST00000624220 967 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 MIR3974-201ENST00000637126 96 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 MFSD8-245ENST00000641743 948 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC073869.10-201ENST00000642016 354 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 LINC01109-201ENST00000603837 3081 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AP000756.2-201ENST00000624168 2567 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 MTND5P31-201ENST00000419366 1374 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC090017.1-201ENST00000548612 1779 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 MTND4P31-201ENST00000425607 1343 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 FAM133CP-201ENST00000332869 704 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 MIR133B-201ENST00000362210 119 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 RNU6-707P-201ENST00000364647 95 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC007738.1-201ENST00000413892 348 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 RPL23AP27-201ENST00000415161 451 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC114814.2-201ENST00000419195 485 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC011233.1-201ENST00000422812 283 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AL353597.2-202ENST00000434901 373 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 MTND4P32-201ENST00000437189 1237 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC007327.1-201ENST00000447461 264 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 FAR2P1-206ENST00000449736 709 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC234781.3-201ENST00000452540 973 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC072052.1-201ENST00000496556 306 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 PGAM1P13-201ENST00000507497 754 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC109464.1-201ENST00000511091 819 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC022882.1-201ENST00000532142 501 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 PDCL2P2-201ENST00000533651 189 ntBASIC5.07□□□□□ -1.6
VPS50Q96JG6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS50Q96JG6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS50Q96JG6 AP005403.1-201ENST00000579720 229 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 657.2 ms