Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 SNORA73.1-201ENST00000363107 205 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 U8.4-201ENST00000363626 134 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 RNU6-1214P-201ENST00000363650 109 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 RNU6-413P-201ENST00000384115 107 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 SNORA40.2-201ENST00000390847 128 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL512430.2-201ENST00000406786 339 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 RNU6-77P-201ENST00000410554 91 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 ELOCP9-201ENST00000418624 239 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC114814.2-201ENST00000419195 485 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 RPS24P8-201ENST00000431490 402 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL353597.2-202ENST00000434901 373 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 SETP8-201ENST00000435341 628 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 MTND6P18-201ENST00000439477 513 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 RPL7AP61-201ENST00000443410 636 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 SETD6P1-201ENST00000444575 317 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 EEF1B2P5-201ENST00000444820 548 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 EIF4A1P11-201ENST00000451239 222 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 NDUFA5P9-201ENST00000472609 340 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC109462.1-201ENST00000491087 368 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC084024.2-201ENST00000503480 791 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC004980.4-201ENST00000513375 203 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC011840.5-201ENST00000582125 771 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 TUSC7.1-201ENST00000610969 165 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 EIF3FP1-201ENST00000613970 806 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC116563.2-201ENST00000624751 535 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AC017037.3-201ENST00000625016 472 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 SAMMSON-227ENST00000642114 1199 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 AL034370.1-201ENST00000397254 1590 ntBASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP3Q96JB5 SMG1P6-201ENST00000532337 2930 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 NACA3P-201ENST00000359690 648 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 SNORD116.1-201ENST00000365628 92 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 ERHP2-201ENST00000402323 299 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AL590084.1-201ENST00000407885 387 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 RNU4-34P-201ENST00000410431 124 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 OR5AW1P-201ENST00000426334 1006 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 NPM1P24-201ENST00000428039 894 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AP001324.1-201ENST00000428553 399 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 RPL35AP21-201ENST00000437667 333 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AL450023.3-201ENST00000440592 271 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 RPL34P20-201ENST00000442771 351 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC092647.3-201ENST00000443044 633 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AL137845.2-201ENST00000444292 988 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 OR6K5P-201ENST00000447050 945 ntBASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK5RAP3Q96JB5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms