Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC083809.1-201ENST00000615051 472 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AL035461.2-201ENST00000619201 524 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AP005019.3-201ENST00000620418 560 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AP002967.1-201ENST00000624203 539 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 AL137100.1-201ENST00000556703 1620 ntBASIC4.54□□□□□ -1.68
CCDC112Q8NEF3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 IPO8P1-201ENST00000455509 3109 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 RNU1-18P-201ENST00000363062 164 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 RN7SKP227-201ENST00000364445 330 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 Z98941.1-201ENST00000407764 100 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 SNORA11F-201ENST00000408237 128 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 UQCRBP1-201ENST00000421129 336 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 AC006065.1-201ENST00000422539 802 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 AP000936.3-201ENST00000438127 255 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 RN7SL93P-201ENST00000463035 293 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 AC026979.1-201ENST00000492525 396 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 RNA5SP73-201ENST00000516744 108 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 RPL12P25-202ENST00000598100 674 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 uc_338.13-201ENST00000618243 179 ntBASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC112Q8NEF3 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.53□□□□□ -1.69
CCDC112Q8NEF3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 OR5P1P-201ENST00000299512 925 ntBASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 HMGN2P8-201ENST00000391458 268 ntBASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 VN1R25P-201ENST00000443385 738 ntBASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 EIF2S2P2-201ENST00000447161 982 ntBASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 VN1R40P-201ENST00000455196 941 ntBASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 SS18L2P2-201ENST00000583960 235 ntBASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 LINC00561-201ENST00000565815 2738 ntBASIC4.52□□□□□ -1.69
CCDC112Q8NEF3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 RNA5SP447-201ENST00000363749 119 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 ELOCP19-201ENST00000411919 318 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 RPL7AP25-201ENST00000423357 805 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC093698.1-201ENST00000423843 571 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 RPL12P34-201ENST00000424532 479 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC073143.1-201ENST00000436316 395 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 SERPINA7P1-201ENST00000443077 631 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 RN7SL271P-201ENST00000487601 295 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC013356.1-201ENST00000489027 564 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 PGBD4P4-201ENST00000509673 613 ntBASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CCDC112Q8NEF3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms