Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 YWHAZP2-201ENST00000440317 728 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 CNOT7P2-201ENST00000441051 832 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 OR7E125P-201ENST00000443450 846 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 MTCYBP42-201ENST00000444653 1130 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AL163193.1-201ENST00000444895 788 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AL050341.1-201ENST00000447743 313 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AURKAPS1-201ENST00000451805 1212 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 MTND2P14-201ENST00000482139 351 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RN7SL30P-201ENST00000488416 306 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 COX6B1P5-201ENST00000509843 249 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AP000926.4-201ENST00000527351 454 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AL356057.1-201ENST00000533798 831 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 MTND4LP24-201ENST00000572277 291 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC011447.4-201ENST00000587562 111 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC016877.3-201ENST00000606778 504 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 OR2BH1P-201ENST00000608850 864 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AL445423.1-201ENST00000609941 536 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 TUSC7.1-201ENST00000610969 165 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC022467.1-201ENST00000614738 749 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC119674.1-212ENST00000641155 993 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RLIMP2-201ENST00000427891 1563 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC104454.1-201ENST00000421341 1401 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 VN2R3P-201ENST00000422626 1412 ntBASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
CLIP4Q8N3C7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 OR14L1P-202ENST00000641545 3009 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 RPL23P2-201ENST00000320371 421 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 RN7SKP269-201ENST00000365545 319 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 SNORD96B-201ENST00000386148 79 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 VDAC2P1-201ENST00000399358 958 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 RPL23AP59-201ENST00000399415 461 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AL357515.1-201ENST00000402967 542 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AL121834.1-202ENST00000404494 277 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 ZNF885P-201ENST00000420174 1098 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC005033.1-201ENST00000428904 813 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 VN1R108P-201ENST00000431580 830 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AL035407.2-201ENST00000454090 378 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC090114.3-201ENST00000479267 829 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 RPS3AP22-201ENST00000488297 769 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 HIGD1AP14-201ENST00000507617 282 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC008565.1-201ENST00000509046 885 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 HMGB1P1-201ENST00000522557 636 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 OR5AK3P-201ENST00000527486 1297 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC109446.2-201ENST00000567872 497 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms