Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 RNU6-697P-201ENST00000363348 107 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 ACTR3P2-201ENST00000439585 1257 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 OR51K1P-201ENST00000510214 950 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 SNORD116-26-201ENST00000516006 96 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 IGKV2-38-201ENST00000517443 247 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 AL161729.3-201ENST00000603533 673 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 AL356218.2-201ENST00000605264 187 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 ERCC6-202ENST00000374127 1782 ntBASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDKL3Q8IVW4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC139713.2-214ENST00000642059 1811 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RNU1-132P-201ENST00000364300 164 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RNA5SP509-201ENST00000364577 119 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RNA5SP513-201ENST00000364648 118 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 SNORA37-201ENST00000384504 129 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RN7SKP182-201ENST00000410772 298 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC004552.1-201ENST00000419089 348 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AL121578.1-201ENST00000428051 892 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 NANOGP6-201ENST00000429190 847 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RPL7P31-201ENST00000450192 724 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 SEPT14P1-201ENST00000458703 648 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC011276.1-201ENST00000469688 323 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RPS26P3-201ENST00000470205 348 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RN7SL860P-201ENST00000473738 223 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC090543.2-201ENST00000483963 348 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC004057.1-201ENST00000485827 348 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RPL29P14-201ENST00000495837 428 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 HNRNPKP5-201ENST00000515300 253 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 RNU4-18P-201ENST00000516751 149 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 PSMB7P1-201ENST00000556349 514 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC007599.1-201ENST00000568688 1174 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 OR1AB1P-201ENST00000585564 761 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC010680.3-201ENST00000604215 520 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AC104662.1-201ENST00000604448 511 ntBASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.25□□□□□ -1.73
CDKL3Q8IVW4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 RNA5SP306-201ENST00000411087 107 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC245028.1-201ENST00000423259 256 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AL138785.1-201ENST00000425821 331 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 GSTA7P-201ENST00000438425 448 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms