Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL008729.2-201ENST00000606393 473 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC017076.1-201ENST00000607613 578 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC009704.2-201ENST00000618739 483 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC017104.5-201ENST00000637647 639 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL049737.1-201ENST00000413920 1403 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 NCLP2-201ENST00000416078 1462 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC119744.1-201ENST00000454746 1715 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 RNA5SP505-201ENST00000364748 108 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 SNORD96B-201ENST00000386148 79 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 DEFB130D-201ENST00000426866 237 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 OR2B7P-201ENST00000429302 934 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AL359265.2-201ENST00000434367 631 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 RPS26P2-201ENST00000440331 348 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 MRPL48P1-201ENST00000445390 636 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 HMGB3P21-201ENST00000452483 547 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC010326.1-201ENST00000462726 602 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 RN7SL459P-201ENST00000481078 302 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 ARL4AP1-201ENST00000503220 705 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC108043.1-201ENST00000512696 574 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 EIF1P6-201ENST00000600054 334 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC069304.3-201ENST00000603938 1084 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC021851.1-201ENST00000608537 1082 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 FAM27B-201ENST00000610601 213 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AP000943.4-201ENST00000622912 357 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AP003400.6-201ENST00000624698 740 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC104446.1-201ENST00000613728 1321 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 AC083899.2-201ENST00000423285 1376 ntBASIC4.86□□□□□ -1.63
PRPF39Q86UA1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF39Q86UA1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 RNU1-32P-201ENST00000363937 159 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 RPS3AP23-201ENST00000401762 784 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 RNU2-6P-201ENST00000411404 190 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 VN1R37P-201ENST00000419096 748 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC005154.2-201ENST00000438110 379 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 RPL23AP37-201ENST00000479658 549 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC092902.1-201ENST00000486999 259 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC093720.1-201ENST00000505681 714 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 RPL7L1P13-201ENST00000511702 739 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 NPM1P6-201ENST00000521088 871 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC022790.1-201ENST00000522872 204 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC139103.1-201ENST00000534696 1030 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 PDCD5P1-201ENST00000543528 309 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC133555.2-201ENST00000550213 292 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC095057.3-201ENST00000567102 1157 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC090079.2-201ENST00000575289 768 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC008745.1-201ENST00000604064 271 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC098935.2-201ENST00000604222 466 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC078880.5-201ENST00000617845 421 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 MIR6853-201ENST00000619642 74 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 AC020978.9-201ENST00000624380 1141 ntBASIC4.85□□□□□ -1.63
PRPF39Q86UA1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms