Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC034105.3-201ENST00000565294 442 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC087588.2-201ENST00000617667 426 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC009248.2-201ENST00000619826 254 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RPL23AP61-201ENST00000623642 466 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 CASC19-221ENST00000641309 1382 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 MTND5P33-201ENST00000571250 1450 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 OR4A15-201ENST00000314706 1035 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SNORA43.1-201ENST00000364863 140 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 RNU6-639P-201ENST00000384074 107 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL157702.1-201ENST00000398764 426 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 PSMA6P1-201ENST00000400275 741 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL162578.1-201ENST00000406202 378 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL139805.1-201ENST00000407837 289 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 RNU4-61P-201ENST00000411243 107 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 MTCYBP8-201ENST00000422855 651 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 NPM1P34-201ENST00000428821 893 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 RPL31P35-201ENST00000431058 377 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SEPT14P3-201ENST00000439401 183 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SUMO1P3-201ENST00000439961 304 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 POU5F1P5-201ENST00000445059 658 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL732372.2-207ENST00000445840 183 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 HMGN1P36-201ENST00000446623 298 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SEPT14P2-201ENST00000453405 183 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.639-201ENST00000458981 102 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 RNU6-1208P-201ENST00000459588 107 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC027575.1-201ENST00000481064 460 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC113367.2-201ENST00000505749 160 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC098799.3-201ENST00000506095 438 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SEPT14P4-201ENST00000513445 186 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 RNU2-46P-201ENST00000517038 113 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC107953.1-201ENST00000522216 297 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 FO082796.1-201ENST00000523795 183 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC025260.1-201ENST00000548858 430 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC004817.2-201ENST00000561794 651 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC018558.5-201ENST00000565840 952 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC090651.1-201ENST00000567865 634 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC141257.3-201ENST00000572906 215 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 GLYATL1P2-202ENST00000588046 902 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC009027.1-201ENST00000604510 479 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AL591167.1-201ENST00000607321 456 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 MIR7109-201ENST00000613748 65 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 MIR6811-201ENST00000620409 58 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.66□□□□□ -1.5
ATG4DQ86TL0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms