Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 FAM3C2-201ENST00000312214 681 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 XIAPP3-201ENST00000312918 795 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 MIR331-201ENST00000362302 94 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 SNORA62.2-201ENST00000364672 152 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 OR6C69P-201ENST00000394268 893 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 RPS3AP54-201ENST00000435535 734 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 UBE2V1P3-201ENST00000439651 417 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 SEPT7P6-201ENST00000469999 1143 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AP000926.3-201ENST00000497201 299 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC146944.2-203ENST00000502493 354 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC139495.1-202ENST00000513164 354 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 CCNHP1-201ENST00000513311 678 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 HNRNPKP5-201ENST00000515300 253 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 SNORD116-26-201ENST00000516006 96 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC025857.1-201ENST00000525252 377 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 CBX3P5-201ENST00000552017 521 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 RPL23AP97-201ENST00000568955 471 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 VN1R79P-201ENST00000593540 513 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 MIR6716-201ENST00000613413 80 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC114781.5-201ENST00000615297 108 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 CCT8P1-201ENST00000413611 1657 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RTL4Q6ZR62 AC105074.1-201ENST00000623380 3095 ntBASIC4.03□□□□□ -1.76
RTL4Q6ZR62 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC068538.1-201ENST00000376856 336 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC091390.1-201ENST00000433904 331 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 EEF1A1P1-201ENST00000447052 739 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 RPL7P31-201ENST00000450192 724 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 RPS20P4-201ENST00000461659 355 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC139783.2-201ENST00000504847 1145 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 PRELID3BP5-201ENST00000508612 460 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 ATP1B1P1-201ENST00000509767 915 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC006499.6-201ENST00000511169 607 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 IFITM8P-201ENST00000522529 394 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 PHBP17-201ENST00000528576 541 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 TOMM20P2-201ENST00000540082 421 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC136624.4-201ENST00000573044 370 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 Z98200.1-201ENST00000607298 470 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 MIR4727-201ENST00000622232 55 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC000123.2-201ENST00000623124 461 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AP000843.1-201ENST00000624880 701 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 AC009452.1-201ENST00000640823 606 ntBASIC4.02□□□□□ -1.77
RTL4Q6ZR62 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTL4Q6ZR62 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.01□□□□□ -1.77
RTL4Q6ZR62 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RTL4Q6ZR62 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.01□□□□□ -1.77
RTL4Q6ZR62 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.01□□□□□ -1.77
RTL4Q6ZR62 AC106871.1-201ENST00000568324 3102 ntBASIC4.01□□□□□ -1.77
RTL4Q6ZR62 RNA5SP175-201ENST00000364275 119 ntBASIC4.01□□□□□ -1.77
RTL4Q6ZR62 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTL4Q6ZR62 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RTL4Q6ZR62 AL035696.2-201ENST00000407941 709 ntBASIC4.01□□□□□ -1.77
RTL4Q6ZR62 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.01□□□□□ -1.77
RTL4Q6ZR62 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms