Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AL590762.4-201ENST00000425885 253 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC105399.1-202ENST00000447303 205 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 MTND2P19-201ENST00000449129 1012 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 MEMO1P4-201ENST00000453590 386 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC010683.1-201ENST00000473673 378 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 RNU6-941P-201ENST00000516346 108 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC022832.1-201ENST00000530718 645 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 OR11J2P-201ENST00000555298 907 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 TRAV15-201ENST00000556680 249 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC004987.4-201ENST00000603383 338 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC087763.1-201ENST00000603391 286 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC103881.1-201ENST00000603476 538 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AL139124.1-201ENST00000609123 421 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 MIR6798-201ENST00000612887 67 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AL392048.1-201ENST00000613946 534 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC107081.3-201ENST00000612715 2034 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AL390862.1-201ENST00000635467 1469 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 BCORP1-203ENST00000513194 5093 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 ADAM5-202ENST00000399789 1942 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 MIR133B-201ENST00000362210 119 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 RNA5SP443-201ENST00000363083 132 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 MIR550A3-201ENST00000390735 95 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL133270.1-201ENST00000402635 279 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 TIMM9P2-201ENST00000419324 266 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC011233.1-201ENST00000422812 283 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL593851.1-201ENST00000426171 157 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 RPP40P1-201ENST00000426762 456 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL606662.1-201ENST00000445763 553 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 RNU6-232P-201ENST00000517144 64 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 PIGPP4-201ENST00000584447 307 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC005962.2-201ENST00000611427 652 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 Mico1.1-201ENST00000611698 204 ntBASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC144BQ3MJ40 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms