Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPL31P61-201ENST00000496160 376 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 RNU6-1334P-201ENST00000516032 105 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 HNRNPCP4-201ENST00000571636 900 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AC008638.3-201ENST00000603341 463 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AL773545.4-201ENST00000637262 310 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AL513478.4-201ENST00000641636 310 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 SNORA70.4-201ENST00000365509 134 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 RN7SKP247-201ENST00000411094 308 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 TCEA1P4-201ENST00000415066 844 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 TRIM60P17-201ENST00000415181 719 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 TPTE2P3-201ENST00000441562 1189 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 FABP3P2-201ENST00000453169 399 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 YPEL5P3-201ENST00000547227 352 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AC012417.1-201ENST00000582307 1039 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AL451044.1-201ENST00000604867 238 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AL451049.1-201ENST00000608672 497 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AC015813.4-201ENST00000610469 179 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AC009237.17-201ENST00000618111 748 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 AC012442.3-202ENST00000636742 206 ntBASIC4.88□□□□□ -1.63
RFX7Q2KHR2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX7Q2KHR2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 SNORD74.4-201ENST00000364129 80 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 RNU6-213P-201ENST00000384051 104 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 MIR513A2-201ENST00000385249 127 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 SNORA3C-201ENST00000408792 125 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 OR5BE1P-201ENST00000425977 939 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 FCF1P7-201ENST00000451185 558 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 RNU6-352P-201ENST00000516908 107 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 AC025627.2-201ENST00000576220 160 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 MIR6868-201ENST00000611215 58 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 AC090246.1-201ENST00000616499 426 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 AC095038.2-201ENST00000621464 1070 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 OR5BE1P-202ENST00000641168 1176 ntBASIC4.87□□□□□ -1.63
RFX7Q2KHR2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX7Q2KHR2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 RNA5SP306-201ENST00000411087 107 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 AL160275.2-201ENST00000412010 394 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 HMGB3P5-201ENST00000428894 612 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 RPS11P1-201ENST00000451072 473 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 RPL5P30-201ENST00000465511 891 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 HPRT1P2-201ENST00000505250 544 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 AC087369.1-201ENST00000520775 996 ntBASIC4.86□□□□□ -1.63
RFX7Q2KHR2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.86□□□□□ -1.63
RFX7Q2KHR2 AC087499.8-201ENST00000578406 226 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms