Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC012339.2-201ENST00000523996 453 ntBASIC4.81□□□□□ -1.64
RAE1P78406 EIF4A2P5-201ENST00000529914 499 ntBASIC4.81□□□□□ -1.64
RAE1P78406 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 AC004825.1-201ENST00000555068 586 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.81□□□□□ -1.64
RAE1P78406 AC116553.2-201ENST00000564203 463 ntBASIC4.81□□□□□ -1.64
RAE1P78406 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 AP003973.1-201ENST00000604639 691 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AL512329.2-201ENST00000607350 548 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC126915.2-201ENST00000610957 190 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC011939.3-201ENST00000613686 466 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC010608.2-201ENST00000624830 470 ntBASIC4.81□□□□□ -1.64
RAE1P78406 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RAE1P78406 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RAE1P78406 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 AC005539.1-201ENST00000443768 1479 ntBASIC4.81□□□□□ -1.64
RAE1P78406 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 AC119744.1-201ENST00000454746 1715 ntBASIC4.8□□□□□ -1.64
RAE1P78406 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 AP000526.1-201ENST00000603308 1388 ntBASIC4.8□□□□□ -1.64
RAE1P78406 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 THAP12P5-201ENST00000405864 2275 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.8□□□□□ -1.64
RAE1P78406 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 ELL2P3-201ENST00000457883 1602 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC109315.1-201ENST00000584143 1347 ntBASIC4.8□□□□□ -1.64
RAE1P78406 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 OR56B2P-201ENST00000317102 954 ntBASIC4.8□□□□□ -1.64
RAE1P78406 Y_RNA.318-201ENST00000365131 97 ntBASIC4.8□□□□□ -1.64
RAE1P78406 MIR217-201ENST00000384817 110 ntBASIC4.8□□□□□ -1.64
RAE1P78406 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.8□□□□□ -1.64
RAE1P78406 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.8□□□□□ -1.64
RAE1P78406 SEPT7P5-201ENST00000434048 306 ntBASIC4.8□□□□□ -1.64
RAE1P78406 PPIAP17-201ENST00000438507 471 ntBASIC4.8□□□□□ -1.64
RAE1P78406 ISCA1P2-201ENST00000438679 421 ntBASIC4.8□□□□□ -1.64
RAE1P78406 RPS29P9-201ENST00000440360 171 ntBASIC4.8□□□□□ -1.64
RAE1P78406 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC118469.1-201ENST00000442943 488 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 AL606662.1-201ENST00000445763 553 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC104306.1-201ENST00000449702 371 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.8□□□□□ -1.64
RAE1P78406 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 MTND3P7-201ENST00000474435 343 ntBASIC4.8□□□□□ -1.64
RAE1P78406 OR2AO1P-201ENST00000476497 403 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC117394.1-201ENST00000477323 567 ntBASIC4.8□□□□□ -1.64
RAE1P78406 RPL21P6-201ENST00000479171 504 ntBASIC4.8□□□□□ -1.64
RAE1P78406 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 RPS27P23-201ENST00000487608 251 ntBASIC4.8□□□□□ -1.64
RAE1P78406 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 AC072052.1-201ENST00000496556 306 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC091435.1-201ENST00000505442 584 ntBASIC4.8□□□□□ -1.64
RAE1P78406 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 AC106872.4-201ENST00000510050 523 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC010285.3-201ENST00000511668 676 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.8□□□□□ -1.64
RAE1P78406 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 RPL23AP53-201ENST00000521854 457 ntBASIC4.8□□□□□ -1.64
RAE1P78406 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.8□□□□□ -1.64
RAE1P78406 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 UBE2NP1-201ENST00000545592 458 ntBASIC4.8□□□□□ -1.64
RAE1P78406 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.8□□□□□ -1.64
RAE1P78406 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.8□□□□□ -1.64
RAE1P78406 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.8□□□□□ -1.64
RAE1P78406 ISCA1P3-201ENST00000577104 373 ntBASIC4.8□□□□□ -1.64
RAE1P78406 MIR4999-201ENST00000585029 91 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 AL390838.2-201ENST00000602394 274 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AL592221.1-201ENST00000605266 382 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC105129.3-201ENST00000605455 485 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC124312.4-201ENST00000605533 310 ntBASIC4.8□□□□□ -1.64
RAE1P78406 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.8□□□□□ -1.64
RAE1P78406 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAE1P78406 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms