Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.88□□□□□ -1.63
CCNA1P78396 IFITM8P-201ENST00000522529 394 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNA1P78396 HNRNPCP4-201ENST00000571636 900 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 Z98200.1-201ENST00000607298 470 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 AP002360.3-201ENST00000607673 710 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 AC007546.1-201ENST00000619452 559 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 AC092159.4-201ENST00000624944 550 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCNA1P78396 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCNA1P78396 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNA1P78396 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNA1P78396 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNA1P78396 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCNA1P78396 RPS26P4-201ENST00000431743 355 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 ARL4AP4-201ENST00000434170 518 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.87□□□□□ -1.63
CCNA1P78396 RNA5SP246-201ENST00000458909 119 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 RPL5P30-201ENST00000465511 891 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 RPL7P22-201ENST00000466005 733 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 MTND6P6-201ENST00000478031 263 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCNA1P78396 FTH1P21-201ENST00000512179 511 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 RNA5SP446-201ENST00000515955 82 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.87□□□□□ -1.63
CCNA1P78396 HMGB3P26-201ENST00000560051 582 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 RN7SL435P-201ENST00000584418 282 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNA1P78396 RPL7P50-201ENST00000600588 727 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 AC090912.3-201ENST00000609775 533 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.87□□□□□ -1.63
CCNA1P78396 AL592437.2-201ENST00000421655 2434 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 AC126323.6-202ENST00000568092 3511 ntBASIC4.87□□□□□ -1.63
CCNA1P78396 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCNA1P78396 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNA1P78396 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNA1P78396 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCNA1P78396 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCNA1P78396 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
CCNA1P78396 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNA1P78396 AC074029.4-201ENST00000624796 1859 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AL049555.1-201ENST00000562834 1933 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCNA1P78396 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
CCNA1P78396 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 RPL36AP10-201ENST00000421785 322 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 MTCO3P21-201ENST00000430791 643 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AL392003.1-201ENST00000434394 243 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNA1P78396 AL031584.1-201ENST00000447169 754 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNA1P78396 CCNHP1-201ENST00000513311 678 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 SMARCE1P4-201ENST00000523647 241 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AC025857.1-201ENST00000525252 377 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CCNA1P78396 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNA1P78396 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.86□□□□□ -1.63
CCNA1P78396 MIR4444-1-201ENST00000581696 74 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 MIR4444-2-201ENST00000584390 74 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AL606490.9-201ENST00000603331 271 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AL160290.3-201ENST00000604869 165 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AC099669.2-201ENST00000616549 437 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 AC234782.5-201ENST00000617723 324 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 MIR6075-201ENST00000620782 95 ntBASIC4.86□□□□□ -1.63
CCNA1P78396 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNA1P78396 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNA1P78396 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
CCNA1P78396 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCNA1P78396 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 OR11H4-201ENST00000315409 1082 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 RNU11-4P-201ENST00000391149 133 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.85□□□□□ -1.63
CCNA1P78396 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 CDY14P-201ENST00000431260 1014 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 AL356276.2-201ENST00000435919 558 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 RPS29P7-201ENST00000439662 171 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 CDY12P-201ENST00000440679 1015 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 CDY13P-201ENST00000445813 1015 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 CDY23P-201ENST00000451661 1014 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms