Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PABPC1P6-201ENST00000445594 1829 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
NR1H2P55055 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NR1H2P55055 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
NR1H2P55055 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NR1H2P55055 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NR1H2P55055 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NR1H2P55055 AC139713.2-215ENST00000641428 5037 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 HMGB1P5-201ENST00000255320 642 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NR1H2P55055 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NR1H2P55055 IL6STP1-201ENST00000346911 1020 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 RNU4-51P-201ENST00000364206 140 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 RN7SKP6-201ENST00000364795 319 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NR1H2P55055 DBIP1-201ENST00000401435 260 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 SFR1P1-201ENST00000403720 688 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 Y_RNA.625-201ENST00000411256 107 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 MTATP6P20-201ENST00000414147 562 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.86□□□□□ -1.63
NR1H2P55055 TMBIM7P-201ENST00000418074 855 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC233981.1-201ENST00000423224 461 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 RPS26P56-201ENST00000444468 240 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 VDAC2P4-201ENST00000452925 711 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 DNAJB5P1-201ENST00000454004 806 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC005532.2-201ENST00000467154 373 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 RPL7P41-201ENST00000485823 957 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC108043.1-201ENST00000512696 574 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 RPL23AP53-201ENST00000521854 457 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NR1H2P55055 AC022882.1-201ENST00000532142 501 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 PDCD5P1-201ENST00000543528 309 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.86□□□□□ -1.63
NR1H2P55055 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
NR1H2P55055 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 MTATP6P24-201ENST00000576835 677 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 RN7SL176P-201ENST00000580352 264 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC011453.2-201ENST00000603737 729 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AL592148.2-201ENST00000612210 372 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 RPSAP73-201ENST00000614820 330 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC123767.1-202ENST00000620407 817 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC004232.3-201ENST00000622977 525 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AL356863.1-201ENST00000623378 1080 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC124312.6-202ENST00000623624 418 ntBASIC4.86□□□□□ -1.63
NR1H2P55055 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NR1H2P55055 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NR1H2P55055 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.86□□□□□ -1.63
NR1H2P55055 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.86□□□□□ -1.63
NR1H2P55055 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NR1H2P55055 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NR1H2P55055 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NR1H2P55055 AC107081.3-201ENST00000612715 2034 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NR1H2P55055 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NR1H2P55055 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NR1H2P55055 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NR1H2P55055 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NR1H2P55055 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NR1H2P55055 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NR1H2P55055 RNA5SP234-201ENST00000363916 119 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.85□□□□□ -1.63
NR1H2P55055 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 OR51B3P-201ENST00000412287 913 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.85□□□□□ -1.63
NR1H2P55055 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 RPF2P1-201ENST00000424137 906 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 HMGB3P5-201ENST00000428894 612 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 AL513175.1-201ENST00000431492 780 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 MTND2P5-201ENST00000432656 1006 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms