Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CASP4P49662 AC016588.2-201ENST00000632484 3021 ntBASIC4.52□□□□□ -1.69
CASP4P49662 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
CASP4P49662 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CASP4P49662 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.51□□□□□ -1.69
CASP4P49662 AC092162.3-201ENST00000624511 1624 ntBASIC4.51□□□□□ -1.69
CASP4P49662 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CASP4P49662 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.51□□□□□ -1.69
CASP4P49662 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CASP4P49662 RNU6-564P-201ENST00000410983 104 ntBASIC4.51□□□□□ -1.69
CASP4P49662 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.51□□□□□ -1.69
CASP4P49662 C4BPAP2-201ENST00000428434 478 ntBASIC4.51□□□□□ -1.69
CASP4P49662 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.51□□□□□ -1.69
CASP4P49662 MTCYBP29-201ENST00000436327 1006 ntBASIC4.51□□□□□ -1.69
CASP4P49662 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.51□□□□□ -1.69
CASP4P49662 VN1R48P-201ENST00000448149 1036 ntBASIC4.51□□□□□ -1.69
CASP4P49662 EIF2S2P5-201ENST00000457635 968 ntBASIC4.51□□□□□ -1.69
CASP4P49662 AC021205.1-201ENST00000468797 348 ntBASIC4.51□□□□□ -1.69
CASP4P49662 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.51□□□□□ -1.69
CASP4P49662 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.51□□□□□ -1.69
CASP4P49662 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.51□□□□□ -1.69
CASP4P49662 AP003730.1-201ENST00000524605 285 ntBASIC4.51□□□□□ -1.69
CASP4P49662 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.51□□□□□ -1.69
CASP4P49662 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.51□□□□□ -1.69
CASP4P49662 AC005229.3-201ENST00000603438 323 ntBASIC4.51□□□□□ -1.69
CASP4P49662 HMGB1P51-201ENST00000605166 638 ntBASIC4.51□□□□□ -1.69
CASP4P49662 AC012603.1-201ENST00000606424 528 ntBASIC4.51□□□□□ -1.69
CASP4P49662 MIR7151-201ENST00000617477 60 ntBASIC4.51□□□□□ -1.69
CASP4P49662 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.51□□□□□ -1.69
CASP4P49662 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.51□□□□□ -1.69
CASP4P49662 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CASP4P49662 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CASP4P49662 MARK2P15-201ENST00000432204 2186 ntBASIC4.51□□□□□ -1.69
CASP4P49662 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.51□□□□□ -1.69
CASP4P49662 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.51□□□□□ -1.69
CASP4P49662 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.51□□□□□ -1.69
CASP4P49662 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CASP4P49662 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CASP4P49662 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CASP4P49662 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.5□□□□□ -1.69
CASP4P49662 SPATA2P1-201ENST00000431223 2055 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC116667.1-201ENST00000604855 2072 ntBASIC4.5□□□□□ -1.69
CASP4P49662 ERCC6-202ENST00000374127 1782 ntBASIC4.5□□□□□ -1.69
CASP4P49662 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CASP4P49662 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CASP4P49662 AC068538.1-201ENST00000376856 336 ntBASIC4.5□□□□□ -1.69
CASP4P49662 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AL035696.2-201ENST00000407941 709 ntBASIC4.5□□□□□ -1.69
CASP4P49662 CYCSP10-201ENST00000417973 294 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.5□□□□□ -1.69
CASP4P49662 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.5□□□□□ -1.69
CASP4P49662 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.5□□□□□ -1.69
CASP4P49662 AL358472.1-201ENST00000431295 329 ntBASIC4.5□□□□□ -1.69
CASP4P49662 RPL23AP46-201ENST00000438548 490 ntBASIC4.5□□□□□ -1.69
CASP4P49662 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.5□□□□□ -1.69
CASP4P49662 APOOP2-201ENST00000461561 539 ntBASIC4.5□□□□□ -1.69
CASP4P49662 OR52A4P-203ENST00000498233 1014 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC017037.1-201ENST00000508460 471 ntBASIC4.5□□□□□ -1.69
CASP4P49662 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CASP4P49662 SNORA31.9-201ENST00000516429 84 ntBASIC4.5□□□□□ -1.69
CASP4P49662 MTND1P6-201ENST00000523621 946 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC069240.1-201ENST00000548774 375 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.5□□□□□ -1.69
CASP4P49662 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CASP4P49662 AC009268.1-201ENST00000561352 1203 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.5□□□□□ -1.69
CASP4P49662 RPL23AP87-202ENST00000573039 466 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC006116.5-201ENST00000591936 559 ntBASIC4.5□□□□□ -1.69
CASP4P49662 MTCO2P22-201ENST00000603246 681 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC114878.2-201ENST00000604863 1251 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC090246.1-201ENST00000616499 426 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AL023881.1-201ENST00000621088 301 ntBASIC4.5□□□□□ -1.69
CASP4P49662 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.5□□□□□ -1.69
CASP4P49662 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CASP4P49662 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.5□□□□□ -1.69
CASP4P49662 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
CASP4P49662 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CASP4P49662 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.5□□□□□ -1.69
CASP4P49662 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CASP4P49662 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CASP4P49662 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.5□□□□□ -1.69
CASP4P49662 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CASP4P49662 OR10J6P-201ENST00000289731 930 ntBASIC4.49□□□□□ -1.69
CASP4P49662 MIR7-1-201ENST00000384871 110 ntBASIC4.49□□□□□ -1.69
CASP4P49662 PGBD4P8-201ENST00000412993 562 ntBASIC4.49□□□□□ -1.69
CASP4P49662 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.49□□□□□ -1.69
CASP4P49662 AL590806.1-201ENST00000415818 853 ntBASIC4.49□□□□□ -1.69
CASP4P49662 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.49□□□□□ -1.69
CASP4P49662 VDAC1P6-201ENST00000430062 855 ntBASIC4.49□□□□□ -1.69
CASP4P49662 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 AC099063.2-201ENST00000446360 662 ntBASIC4.49□□□□□ -1.69
CASP4P49662 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.49□□□□□ -1.69
CASP4P49662 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 MTND3P6-201ENST00000485242 339 ntBASIC4.49□□□□□ -1.69
CASP4P49662 RPS27AP13-201ENST00000498403 237 ntBASIC4.49□□□□□ -1.69
CASP4P49662 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.49□□□□□ -1.69
CASP4P49662 RN7SKP122-201ENST00000515923 296 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms