Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.52□□□□□ -1.69
BRCC3P46736 AL117339.2-201ENST00000430475 180 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 MRPL50P1-201ENST00000431951 384 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 KCTD10P1-201ENST00000434203 625 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.52□□□□□ -1.69
BRCC3P46736 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.52□□□□□ -1.69
BRCC3P46736 AC122718.1-201ENST00000439448 744 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.52□□□□□ -1.69
BRCC3P46736 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.52□□□□□ -1.69
BRCC3P46736 FAM133DP-201ENST00000464802 691 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC104629.2-201ENST00000468627 598 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC037198.2-201ENST00000478845 733 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC113430.1-201ENST00000506872 718 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.52□□□□□ -1.69
BRCC3P46736 AC134698.5-201ENST00000519444 336 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC018442.3-201ENST00000523025 183 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC109635.6-201ENST00000525487 1113 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.52□□□□□ -1.69
BRCC3P46736 AC006064.5-201ENST00000541782 248 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 OR8R1P-201ENST00000543943 764 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.52□□□□□ -1.69
BRCC3P46736 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.52□□□□□ -1.69
BRCC3P46736 AC092868.3-201ENST00000560515 784 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC084759.1-201ENST00000561168 290 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC106785.1-201ENST00000565935 262 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AL137072.1-201ENST00000603444 466 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC104307.1-201ENST00000616142 196 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
BRCC3P46736 AC019080.5-201ENST00000624891 757 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 DDX18P4-201ENST00000511690 1966 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
BRCC3P46736 AC027228.2-201ENST00000567141 2154 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
BRCC3P46736 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
BRCC3P46736 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
BRCC3P46736 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.51□□□□□ -1.69
BRCC3P46736 RNU11-4P-201ENST00000391149 133 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 RPL23AP4-201ENST00000427757 463 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 AL590623.1-201ENST00000427864 105 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCC3P46736 MRPS33P4-201ENST00000434892 317 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 MTCYBP21-201ENST00000443300 1113 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.51□□□□□ -1.69
BRCC3P46736 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 RPL7L1P1-201ENST00000448259 785 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 RPS29P19-201ENST00000479709 171 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 PCNAP1-201ENST00000505363 709 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCC3P46736 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCC3P46736 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCC3P46736 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.51□□□□□ -1.69
BRCC3P46736 OR8X1P-201ENST00000534542 869 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCC3P46736 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCC3P46736 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCC3P46736 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.51□□□□□ -1.69
BRCC3P46736 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCC3P46736 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.51□□□□□ -1.69
BRCC3P46736 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCC3P46736 AL161637.1-201ENST00000622380 412 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.51□□□□□ -1.69
BRCC3P46736 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCC3P46736 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCC3P46736 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCC3P46736 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
BRCC3P46736 RLIMP1-201ENST00000339626 1680 ntBASIC4.51□□□□□ -1.69
BRCC3P46736 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCC3P46736 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.5□□□□□ -1.69
BRCC3P46736 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCC3P46736 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.5□□□□□ -1.69
BRCC3P46736 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCC3P46736 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.5□□□□□ -1.69
BRCC3P46736 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
BRCC3P46736 RPL21P65-201ENST00000406094 466 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.5□□□□□ -1.69
BRCC3P46736 RNU6-628P-201ENST00000410675 107 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.5□□□□□ -1.69
BRCC3P46736 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.5□□□□□ -1.69
BRCC3P46736 OR51A6P-201ENST00000418680 1004 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AL606490.7-201ENST00000433136 191 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AC007563.3-201ENST00000433233 371 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.5□□□□□ -1.69
BRCC3P46736 MTCYBP29-201ENST00000436327 1006 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.5□□□□□ -1.69
BRCC3P46736 AC073587.1-201ENST00000447093 876 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AL132838.2-201ENST00000492041 314 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AC104164.2-201ENST00000496953 495 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.5□□□□□ -1.69
BRCC3P46736 RNA5SP360-201ENST00000516555 118 ntBASIC4.5□□□□□ -1.69
BRCC3P46736 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms