Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX3P41225 AL445984.1-201ENST00000637834 659 ntBASIC4.26□□□□□ -1.73
SOX3P41225 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SOX3P41225 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX3P41225 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
SOX3P41225 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SOX3P41225 OR14L1P-202ENST00000641545 3009 ntBASIC4.26□□□□□ -1.73
SOX3P41225 CASC19-284ENST00000642142 1868 ntBASIC4.26□□□□□ -1.73
SOX3P41225 AL606537.1-201ENST00000607258 2011 ntBASIC4.26□□□□□ -1.73
SOX3P41225 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX3P41225 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX3P41225 KARSP3-201ENST00000571212 1504 ntBASIC4.26□□□□□ -1.73
SOX3P41225 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX3P41225 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX3P41225 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SOX3P41225 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SOX3P41225 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SOX3P41225 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX3P41225 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX3P41225 AC021146.4-201ENST00000309229 279 ntBASIC4.25□□□□□ -1.73
SOX3P41225 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
SOX3P41225 RNA5SP28-201ENST00000363841 119 ntBASIC4.25□□□□□ -1.73
SOX3P41225 RNU1-32P-201ENST00000363937 159 ntBASIC4.25□□□□□ -1.73
SOX3P41225 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.25□□□□□ -1.73
SOX3P41225 RNU6-468P-201ENST00000384003 109 ntBASIC4.25□□□□□ -1.73
SOX3P41225 MIR142-201ENST00000384835 87 ntBASIC4.25□□□□□ -1.73
SOX3P41225 RN7SKP222-201ENST00000410651 315 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AC016397.1-201ENST00000412463 242 ntBASIC4.25□□□□□ -1.73
SOX3P41225 VDAC1P9-201ENST00000412766 841 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AC105402.1-201ENST00000413336 545 ntBASIC4.25□□□□□ -1.73
SOX3P41225 LINC01347-201ENST00000417964 355 ntBASIC4.25□□□□□ -1.73
SOX3P41225 UQCRBP1-201ENST00000421129 336 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AC009480.2-201ENST00000422916 432 ntBASIC4.25□□□□□ -1.73
SOX3P41225 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 FO393414.1-201ENST00000428697 1184 ntBASIC4.25□□□□□ -1.73
SOX3P41225 RPL23AP1-201ENST00000428990 471 ntBASIC4.25□□□□□ -1.73
SOX3P41225 CNOT7P1-201ENST00000429006 852 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SOX3P41225 AP000936.3-201ENST00000438127 255 ntBASIC4.25□□□□□ -1.73
SOX3P41225 YWHAZP2-201ENST00000440317 728 ntBASIC4.25□□□□□ -1.73
SOX3P41225 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.25□□□□□ -1.73
SOX3P41225 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 AL035551.1-201ENST00000446931 348 ntBASIC4.25□□□□□ -1.73
SOX3P41225 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 AL162591.2-201ENST00000449634 317 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 AL133244.1-201ENST00000456007 258 ntBASIC4.25□□□□□ -1.73
SOX3P41225 SCARNA10-201ENST00000459255 330 ntBASIC4.25□□□□□ -1.73
SOX3P41225 RPL7AP28-201ENST00000464513 571 ntBASIC4.25□□□□□ -1.73
SOX3P41225 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.25□□□□□ -1.73
SOX3P41225 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.25□□□□□ -1.73
SOX3P41225 AC008083.2-201ENST00000546707 476 ntBASIC4.25□□□□□ -1.73
SOX3P41225 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.25□□□□□ -1.73
SOX3P41225 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SOX3P41225 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 AC100847.1-201ENST00000611316 481 ntBASIC4.25□□□□□ -1.73
SOX3P41225 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX3P41225 SNX18P1Y-201ENST00000616231 511 ntBASIC4.25□□□□□ -1.73
SOX3P41225 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.25□□□□□ -1.73
SOX3P41225 AC004808.1-201ENST00000627671 721 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AC000123.3-201ENST00000624029 4975 ntBASIC4.25□□□□□ -1.73
SOX3P41225 OR51H2P-202ENST00000641424 3046 ntBASIC4.25□□□□□ -1.73
SOX3P41225 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX3P41225 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SOX3P41225 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX3P41225 CCT8P1-201ENST00000413611 1657 ntBASIC4.25□□□□□ -1.73
SOX3P41225 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
SOX3P41225 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX3P41225 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX3P41225 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SOX3P41225 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX3P41225 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX3P41225 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX3P41225 AC091046.3-201ENST00000631455 1574 ntBASIC4.24□□□□□ -1.73
SOX3P41225 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SOX3P41225 AC135352.1-201ENST00000506173 1418 ntBASIC4.24□□□□□ -1.73
SOX3P41225 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX3P41225 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SOX3P41225 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.24□□□□□ -1.73
SOX3P41225 RNU6-452P-201ENST00000384406 107 ntBASIC4.24□□□□□ -1.73
SOX3P41225 MIR129-1-201ENST00000384972 72 ntBASIC4.24□□□□□ -1.73
SOX3P41225 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AL355615.1-201ENST00000406187 641 ntBASIC4.24□□□□□ -1.73
SOX3P41225 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 RPEP3-201ENST00000425462 676 ntBASIC4.24□□□□□ -1.73
SOX3P41225 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX3P41225 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 AC097499.1-201ENST00000444277 208 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC092685.1-201ENST00000447960 1243 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX3P41225 AC009220.1-201ENST00000451614 275 ntBASIC4.24□□□□□ -1.73
SOX3P41225 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 MTND2P28-201ENST00000457540 1044 ntBASIC4.24□□□□□ -1.73
SOX3P41225 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms