Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL354984.3-201ENST00000604803 325 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.17□□□□□ -1.74
SHMT2P34897 AC019131.2-201ENST00000609071 870 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC005962.2-201ENST00000611427 652 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC007546.1-201ENST00000619452 559 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.17□□□□□ -1.74
SHMT2P34897 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.17□□□□□ -1.74
SHMT2P34897 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 MIR3653-201ENST00000625572 110 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.17□□□□□ -1.74
SHMT2P34897 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHMT2P34897 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.16□□□□□ -1.74
SHMT2P34897 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SHMT2P34897 AC009951.1-201ENST00000623674 2614 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AC074029.4-201ENST00000624796 1859 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 RNU1-14P-201ENST00000362759 152 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 RNU1-132P-201ENST00000364300 164 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 RPL6P29-201ENST00000414863 865 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AL157831.1-201ENST00000426134 473 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 RPL23AP4-201ENST00000427757 463 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 PRELID3BP10-201ENST00000431957 584 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 ELOCP18-201ENST00000434209 337 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 VN1R48P-201ENST00000448149 1036 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 MORF4L1P4-201ENST00000450245 976 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 RPL23AP81-201ENST00000455252 467 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AL133244.1-201ENST00000456007 258 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AC091167.1-201ENST00000492017 396 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 HNRNPKP5-201ENST00000515300 253 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 RN7SKP122-201ENST00000515923 296 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 RNA5SP73-201ENST00000516744 108 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.16□□□□□ -1.74
SHMT2P34897 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 AC067805.1-201ENST00000559344 470 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.16□□□□□ -1.74
SHMT2P34897 MIR3138-201ENST00000585238 82 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 BMS1P7-201ENST00000602440 1052 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 FAM27D1-201ENST00000612308 341 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 MIR6716-201ENST00000613413 80 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SHMT2P34897 AC074276.2-201ENST00000619891 348 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.16□□□□□ -1.74
SHMT2P34897 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.16□□□□□ -1.74
SHMT2P34897 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SHMT2P34897 AC019080.5-201ENST00000624891 757 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 AC092159.4-201ENST00000624944 550 ntBASIC4.16□□□□□ -1.74
SHMT2P34897 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.16□□□□□ -1.74
SHMT2P34897 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.16□□□□□ -1.74
SHMT2P34897 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.16□□□□□ -1.74
SHMT2P34897 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHMT2P34897 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHMT2P34897 HSPA8P17-201ENST00000427029 1382 ntBASIC4.15□□□□□ -1.74
SHMT2P34897 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHMT2P34897 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.15□□□□□ -1.74
SHMT2P34897 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.74
SHMT2P34897 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHMT2P34897 MIR383-201ENST00000362257 73 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AL049693.1-201ENST00000402760 611 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHMT2P34897 MFSD13B-201ENST00000420133 1290 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.15□□□□□ -1.75
SHMT2P34897 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.15□□□□□ -1.75
SHMT2P34897 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.15□□□□□ -1.75
SHMT2P34897 RN7SL385P-201ENST00000468873 276 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 RN7SL691P-201ENST00000494487 301 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 RPS6P4-201ENST00000494693 758 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.15□□□□□ -1.75
SHMT2P34897 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.15□□□□□ -1.75
SHMT2P34897 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.15□□□□□ -1.75
SHMT2P34897 AC008958.1-201ENST00000511047 682 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 KCTD9P2-201ENST00000512203 1013 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 RNU6-491P-201ENST00000516099 110 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 RNA5SP49-201ENST00000516450 115 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.15□□□□□ -1.75
SHMT2P34897 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.15□□□□□ -1.75
SHMT2P34897 AC006064.5-201ENST00000541782 248 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AC087888.1-201ENST00000550884 1254 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 AL109766.1-201ENST00000555080 552 ntBASIC4.15□□□□□ -1.75
SHMT2P34897 TVP23BP1-201ENST00000557500 617 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms